Non-Coding RNA Search

Ss1.1-Pig2-90B04.5

Sequence:


               
               GTTTATCTTCTCTCTCCCTCCTTTCTTCAATCCCTCCCTCCCTCTCTCTCCAAATTAAAC
ACTGTCCATCATTGAAGGTATATGGTAATAGCACCCTAAGAGAAGACAGCAAAGGAGATG
TTCCTGCTTGGAAAGTATGTATTCCTCAAAAATTGCTCCCTTTTCAGCAGGGTTTGAATC
ACTCAGATTCCTCCTGGTATATTTTAAACCAAAGACAAAGTGAAGCAGGTGTTACTTGGG
TGACGGGGAAGAAAGTATCGTAATGTGGCTAATGTTTAACTTGAATAATGATACTTAAAC
ACTTCTAAGGTGCCTTTATCACCTGCCAGATTCTTTCTTGGTAAAGTTTTACCCACATCT
TCCCTTTTTGCCCATGGTGATCCAGTCTCACCCACCCATATCTGGAGGTATTAACTAGGA
GTGTCATTACCTATCAGAAATATGTATGTGCCTTCTCCTTGGGCCACCCTGAATTTGGGG
ATTCATGGTGATTCCTTTTATGAATAATTAATAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTATCTTCTCTCTCCCTCCTTTCTTCAATCCCTCCCTCCCTCTCTCTCCAAATTAAAC
ACTGTCCATCATTGAAGGTATATGGTAATAGCACCCTAAGAGAAGACAGCAAAGGAGATG
TTCCTGCTTGGAAAGTATGTATTCCTCAAAAATTGCTCCCTTTTCAGCAGGGTTTGAATC
ACTCAGATTCCTCCTGGTATATTTTAAACCAAAGACAAAGTGAAGCAGGTGTTACTTGGG
TGACGGGGAAGAAAGTATCGTAATGTGGCTAATGTTTAACTTGAATAATGATACTTAAAC
ACTTCTAAGGTGCCTTTATCACCTGCCAGATTCTTTCTTGGTAAAGTTTTACCCACATCT
TCCCTTTTTGCCCATGGTGATCCAGTCTCACCCACCCATATCTGGAGGTATTAACTAGGA
GTGTCATTACCTATCAGAAATATGTATGTGCCTTCTCCTTGGGCCACCCTGAATTTGGGG
ATTCATGGTGATTCCTTTTATGAATAATTAATAAGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               120-230, - strand, RNAz p=0.630297

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-230, - strand, RNAz p=0.630297

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               6-512, gnl|bosTau2|chr8 (53471179-53471683)
               

               
               6-512, gnl|Hg17|chr9 (110042056-110041451)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-512, gnl|bosTau2|chr8 (53471179-53471683)
               

               
               6-512, gnl|Hg17|chr9 (110042056-110041451)

	6-512, gnl\|bosTau2\|chr8 (53471179-53471683)
	6-512, gnl\|Hg17\|chr9 (110042056-110041451)