Ss1.1-Pig2-90O14.5
|
GGCAGGGTTTGTCCTTAACCCTGACGTCAGATCTTGCTTTAATAAAACCCCCCAAGGGCT
GCGGGAAGAGGCGTATCTGGCGCCCCTGATGGGACAGGCATGAGGTGGTTCCTGCCCTGG
ACGCTGGCGGCAGTGACAGCAGCAGCAGCAGCAGCAGCATCAGGCAGCGCCCTGGCCACG
ACCCCACCCCCACCAGCCCGCTGCTCAGAGCCTCTTCTGGCAACTTGGATGCTCCCCTCC
CAGCTCTGGGCCCCTCCTGCCCACGCTTGTCCAGGATGCTGGTGAGAGTGCCCTTGTGAG
GACTTGCCTTCTGGAATGGGCACAGAGCAGTGTTTCCCGGGAGACCAGATCCTGACCTCG
GGCTGTGGGCGATGCCTCCAGGACATCAGCAGACCCGCCACCCCAGGTTTAAGGAAAGGC
CCCTGCCCCAGCCTGCAAGGCAGCCAAACACCAGGAGGCTGTCTTTGTACAAACAGAAAC
CCTGGAATTCCTCCCAGGAACCTTTGCCATCTCTCTGAGCGGCGGGGAGGGGCTGCCATA
CATGTTGTAGGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGCAGGGTTTGTCCTTAACCCTGACGTCAGATCTTGCTTTAATAAAACCCCCCAAGGGCT
GCGGGAAGAGGCGTATCTGGCGCCCCTGATGGGACAGGCATGAGGTGGTTCCTGCCCTGG
ACGCTGGCGGCAGTGACAGCAGCAGCAGCAGCAGCAGCATCAGGCAGCGCCCTGGCCACG
ACCCCACCCCCACCAGCCCGCTGCTCAGAGCCTCTTCTGGCAACTTGGATGCTCCCCTCC
CAGCTCTGGGCCCCTCCTGCCCACGCTTGTCCAGGATGCTGGTGAGAGTGCCCTTGTGAG
GACTTGCCTTCTGGAATGGGCACAGAGCAGTGTTTCCCGGGAGACCAGATCCTGACCTCG
GGCTGTGGGCGATGCCTCCAGGACATCAGCAGACCCGCCACCCCAGGTTTAAGGAAAGGC
CCCTGCCCCAGCCTGCAAGGCAGCCAAACACCAGGAGGCTGTCTTTGTACAAACAGAAAC
CCTGGAATTCCTCCCAGGAACCTTTGCCATCTCTCTGAGCGGCGGGGAGGGGCTGCCATA
CATGTTGTAGGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
319-423, - strand, RNAmicro p=0.988457 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
319-423, - strand, RNAmicro p=0.988457 |
|
182-288, gnl|bosTau2|chr14 (4753540-4753647) |
|
182-288, gnl|canFam2|chr13 (32688415-32688863) |
|
182-288, gnl|hg17|chr8 (134276771-134277243) |
|
182-288, gnl|Hg17|chr8 (134276942-134277048) |
|
182-288, gnl|mm7|chr15 (66977780-66978209) |
|
182-288, gnl|panTro1|chr7 (137254361-137254833) |
|
182-288, gnl|rheMac2|chr8 (135760739-135761241) |
|
182-288, gnl|rn3|chr7 (104299953-104300385) |
| |
|
290-552, gnl|bosTau2|chr14 (4753682-4753952) |
|
290-552, gnl|Hg17|chr8 (134277082-134277357) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
182-288, gnl|bosTau2|chr14 (4753540-4753647) |
|
182-288, gnl|canFam2|chr13 (32688415-32688863) |
|
182-288, gnl|hg17|chr8 (134276771-134277243) |
|
182-288, gnl|Hg17|chr8 (134276942-134277048) |
|
182-288, gnl|mm7|chr15 (66977780-66978209) |
|
182-288, gnl|panTro1|chr7 (137254361-137254833) |
|
182-288, gnl|rheMac2|chr8 (135760739-135761241) |
|
182-288, gnl|rn3|chr7 (104299953-104300385) |
| |
|
290-552, gnl|bosTau2|chr14 (4753682-4753952) |
|
290-552, gnl|Hg17|chr8 (134277082-134277357) |
