Non-Coding RNA Search

Ss1.1-Pig2-92C13.5

Sequence:


               
               GCCATGCATGATATCCCTGCCTCAGAGATGCCAAGCAGTTCTGAGGCCCAGACCGTGCCC
CCCAATCAGGAGCAGGAGGATGCCCCCAGGTCCTTACAGGAAGTTCCACGCCCTTCCACA
GGTGCGGTGCCGGCCATCATGCCAATAATCCGCACTGGTGAGGCGGCACACGGCGTGGCC
ATCACTAGGCTGAACCCGGGGGTTCGCAGGGTGTCTCTTGGCTATGAGTCTTCACCAGAT
GGTTCCCGGCGGCCCCTTTTTAGCCACGAGTCGCCGCTGGTGTCTCAGGATTCTCTTAGT
TCCAGGGCTCCTTTGGACAGTCACCAGCCATCCCTGACTCCCGCTGTACTCCAGGGCCCT
GAGGACGCTGGCGTGTCTGGTGGCCAAGCGTGGAACTCCGCCATCCCCAGTGTCGCAGTC
GGGCCCAGGAACAGCACCATAGTCCCTGGTGGCACATGGGAGCCAGCCAGGGGCACTGTG
CCATGGGAGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCATGCATGATATCCCTGCCTCAGAGATGCCAAGCAGTTCTGAGGCCCAGACCGTGCCC
CCCAATCAGGAGCAGGAGGATGCCCCCAGGTCCTTACAGGAAGTTCCACGCCCTTCCACA
GGTGCGGTGCCGGCCATCATGCCAATAATCCGCACTGGTGAGGCGGCACACGGCGTGGCC
ATCACTAGGCTGAACCCGGGGGTTCGCAGGGTGTCTCTTGGCTATGAGTCTTCACCAGAT
GGTTCCCGGCGGCCCCTTTTTAGCCACGAGTCGCCGCTGGTGTCTCAGGATTCTCTTAGT
TCCAGGGCTCCTTTGGACAGTCACCAGCCATCCCTGACTCCCGCTGTACTCCAGGGCCCT
GAGGACGCTGGCGTGTCTGGTGGCCAAGCGTGGAACTCCGCCATCCCCAGTGTCGCAGTC
GGGCCCAGGAACAGCACCATAGTCCCTGGTGGCACATGGGAGCCAGCCAGGGGCACTGTG
CCATGGGAGGCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               158-277, - strand, RNAz p=0.573974

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               158-277, - strand, RNAz p=0.573974

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-346, gnl|bosTau2|chr7 (4186569-4186913)
               

               
               2-346, gnl|Hg17|chr19 (18230272-18229971)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-346, gnl|bosTau2|chr7 (4186569-4186913)
               

               
               2-346, gnl|Hg17|chr19 (18230272-18229971)

	2-346, gnl\|bosTau2\|chr7 (4186569-4186913)
	2-346, gnl\|Hg17\|chr19 (18230272-18229971)