Non-Coding RNA Search

Ss1.1-Pig2-92K08.5

Sequence:


               
               GGCAGCTGCTGCCTGCAGAACAGGACGAGGACACCGAGGGCATGTGCAAGCCTCTGTCCT
GTGGCTGGGAGATCACAGACACCTTGTGCATGGGCCCTGTCTTCACTCGGCGAGCATCAT
GTGAGCAGGCCCCCGTTCCCCTCTGGAGAACCCCAGCGGGGCTGCAGAGATGCCTCTGGG
AGAGGTGGGGAAGGTGGCGAGCAGGGGCAACCTCTGGCCAGGACTCTGGTGCTCGCTCTG
CTGCCCCCCACGCTCCGCCTGTAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTC
GCTGTAGTTCAAGTATGCAACATAAACCCTGTCCCTTCCAGCTGTGTCTGCCTCCTCTGC
AGCGCAAGGGGCCTGGTCAGCCAGGTGTGGGGGTGTAGTTGGGGGTTTCCCGTGGTCTCC
TTCCCCCTCTTTGTAAATATGAAACAAATAAATATTTAGGTTTTTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCAGCTGCTGCCTGCAGAACAGGACGAGGACACCGAGGGCATGTGCAAGCCTCTGTCCT
GTGGCTGGGAGATCACAGACACCTTGTGCATGGGCCCTGTCTTCACTCGGCGAGCATCAT
GTGAGCAGGCCCCCGTTCCCCTCTGGAGAACCCCAGCGGGGCTGCAGAGATGCCTCTGGG
AGAGGTGGGGAAGGTGGCGAGCAGGGGCAACCTCTGGCCAGGACTCTGGTGCTCGCTCTG
CTGCCCCCCACGCTCCGCCTGTAGTGTTTCTGCCCTGTAAATAGGACCAGTCTTACACTC
GCTGTAGTTCAAGTATGCAACATAAACCCTGTCCCTTCCAGCTGTGTCTGCCTCCTCTGC
AGCGCAAGGGGCCTGGTCAGCCAGGTGTGGGGGTGTAGTTGGGGGTTTCCCGTGGTCTCC
TTCCCCCTCTTTGTAAATATGAAACAAATAAATATTTAGGTTTTTTAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61843911|ref|XP_583492.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61843911|ref|XP_583492.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               119-278, + strand, RNAz p=0.930053

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               119-278, + strand, RNAz p=0.930053

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of NM_052998, +

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_052998, +

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-468, gnl|bosTau2|chr2 (71651090-71651557)
               

               
               1-468, gnl|Hg17|chr1 (33254752-33255218)
               

               
               1-468, gnl|Mm7|chr4 (128377124-128376659)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-468, gnl|bosTau2|chr2 (71651090-71651557)
               

               
               1-468, gnl|Hg17|chr1 (33254752-33255218)
               

               
               1-468, gnl|Mm7|chr4 (128377124-128376659)

	1-468, gnl\|bosTau2\|chr2 (71651090-71651557)
	1-468, gnl\|Hg17\|chr1 (33254752-33255218)
	1-468, gnl\|Mm7\|chr4 (128377124-128376659)