Non-Coding RNA Search

Ss1.1-Pig2-96F03.5

Sequence:


               
               AACACCAAGATGGCAGCAAATCGCTGAAACTGGGCGACTTTGGGCTGGCCACCATCGTAG
ACGGCCCCCTGTACACCGTCTGTGGCACCCCNACATACGTGGCTCCAGAAATCATTGCAG
AGACTGGATACGGCCTCAAGGTGGACATCTGGGCAGGCTGGTGTCATCCTTACATCCTGC
TGTGTGGTTTCCCTCCGTNCCGTGGGAGCGGTGATGACCAGGAGGTGCTTTTTGATCAGA
TTCTGATGGGGCAAGTGGACTTCCCTTCTCCATATTGGGATAATGTTTCTGATTCTGCAA
AGGAGCTCATTACCATGATGCTGTTGGTGGATGTTGATCAGCGATTTTCAGCCGTGCAAG
TCCTTGAACATCCCTGGGTTAACGATGACGGCCTCCCAGAAAATGAGCATCAGCTGTCAG
TAGCAGGAAAGATAAAGAAGCATTTCAACACAGGCCCCAAACCGAACAGCACAGCAGCTG
GAGTTTCTGTCATAGCAGCCCCTGCTAGACCACCGCTCTTGATAAGGACCACCTCAATAT
TTCAGGGCTCAAGATGCCAAGAGGCATCGCCATTGACTGGGTGGCTGGGAACGTGTACTG
ACTCAACTCGGAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTGTTCGCTCCCCAAA
TTCACCCTTTTAATAAGAAGTCCTAGCTTAACCCTTTGTGGTGGATCCGCTGAGGGGCAC
CATGTACTGGTCAGATTGGGGGAACCACCCCAAGATTGAAACAGCAGCGATGGATGGGAC
CCTTCGGGAGACACTGGTACAGGACAACATCCAGTGGCCCACAGGCCTGGCCGTGGATTA
CCACAATGAACGACTGTACTGGGAAAATAACAAGCTCTCGGTCATCGGCAGCATCCGGCT
CAACGGCACAGACCCCATCGTGGCTGCTGACAGCAAACGAGGCCTCAGTCACCCCTTCAG
CATCGATGTCTTTGAGGATTACCTAGTTCTAGATCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACACCAAGATGGCAGCAAATCGCTGAAACTGGGCGACTTTGGGCTGGCCACCATCGTAG
ACGGCCCCCTGTACACCGTCTGTGGCACCCCNACATACGTGGCTCCAGAAATCATTGCAG
AGACTGGATACGGCCTCAAGGTGGACATCTGGGCAGGCTGGTGTCATCCTTACATCCTGC
TGTGTGGTTTCCCTCCGTNCCGTGGGAGCGGTGATGACCAGGAGGTGCTTTTTGATCAGA
TTCTGATGGGGCAAGTGGACTTCCCTTCTCCATATTGGGATAATGTTTCTGATTCTGCAA
AGGAGCTCATTACCATGATGCTGTTGGTGGATGTTGATCAGCGATTTTCAGCCGTGCAAG
TCCTTGAACATCCCTGGGTTAACGATGACGGCCTCCCAGAAAATGAGCATCAGCTGTCAG
TAGCAGGAAAGATAAAGAAGCATTTCAACACAGGCCCCAAACCGAACAGCACAGCAGCTG
GAGTTTCTGTCATAGCAGCCCCTGCTAGACCACCGCTCTTGATAAGGACCACCTCAATAT
TTCAGGGCTCAAGATGCCAAGAGGCATCGCCATTGACTGGGTGGCTGGGAACGTGTACTG
ACTCAACTCGGAATCGGAAGACTACTCCCCAAGCTCCTCCGAGACTGTTCGCTCCCCAAA
TTCACCCTTTTAATAAGAAGTCCTAGCTTAACCCTTTGTGGTGGATCCGCTGAGGGGCAC
CATGTACTGGTCAGATTGGGGGAACCACCCCAAGATTGAAACAGCAGCGATGGATGGGAC
CCTTCGGGAGACACTGGTACAGGACAACATCCAGTGGCCCACAGGCCTGGCCGTGGATTA
CCACAATGAACGACTGTACTGGGAAAATAACAAGCTCTCGGTCATCGGCAGCATCCGGCT
CAACGGCACAGACCCCATCGTGGCTGCTGACAGCAAACGAGGCCTCAGTCACCCCTTCAG
CATCGATGTCTTTGAGGATTACCTAGTTCTAGATCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55623712|ref|XP_526787.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55623712|ref|XP_526787.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               818-942, gnl|bosTau2|chr5 (32479869-32479745)
               

               
               818-942, gnl|Hg17|chr12 (55889126-55889250)
               

               
               818-942, gnl|Mm7|chr10 (127043696-127043572)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               818-942, gnl|bosTau2|chr5 (32479869-32479745)
               

               
               818-942, gnl|Hg17|chr12 (55889126-55889250)
               

               
               818-942, gnl|Mm7|chr10 (127043696-127043572)

	818-942, gnl\|bosTau2\|chr5 (32479869-32479745)
	818-942, gnl\|Hg17\|chr12 (55889126-55889250)
	818-942, gnl\|Mm7\|chr10 (127043696-127043572)