Non-Coding RNA Search

Ss1.1-Pig2-97A09.5

Sequence:


               
               CTATGGTTGTTTCATGAAAAGTTTTTGTGTAAATGATACACAATCAGCTGCATTCATTGA
TGTGTGAACGAGGAAGCATTGGTCACTTGAGGAGCAGCACACTTCGGCCCTGGGAGGAAG
GTAGCCAGATAACTGCCTGGGAGAAGTGATAGGTGCACAAAAACAGATGTGTACACGGTG
ACTGGCTGTAGTCTTTATAGATCAGCTAACTCACAAATTCTCTCCTGTACTGTTTTGTTC
TGCAATTTAGAGCCAGGAACTTGGCACATTCCAGGCTGCCCGTCTCCTTGCTGGCAGAGG
AATAGAGCACTGAGGAGGCAGCCATTTAAAGCTGGTTAAATCCGTGAAAACGAAGATGGT
TTGTCAGGACACCTCTCTCCCAGCACCTGGCATTAACTTCTCACTCTGATGAACATGATG
GGTACAAGGGCCAAAGACCAACCTTGAGAAATAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTATGGTTGTTTCATGAAAAGTTTTTGTGTAAATGATACACAATCAGCTGCATTCATTGA
TGTGTGAACGAGGAAGCATTGGTCACTTGAGGAGCAGCACACTTCGGCCCTGGGAGGAAG
GTAGCCAGATAACTGCCTGGGAGAAGTGATAGGTGCACAAAAACAGATGTGTACACGGTG
ACTGGCTGTAGTCTTTATAGATCAGCTAACTCACAAATTCTCTCCTGTACTGTTTTGTTC
TGCAATTTAGAGCCAGGAACTTGGCACATTCCAGGCTGCCCGTCTCCTTGCTGGCAGAGG
AATAGAGCACTGAGGAGGCAGCCATTTAAAGCTGGTTAAATCCGTGAAAACGAAGATGGT
TTGTCAGGACACCTCTCTCCCAGCACCTGGCATTAACTTCTCACTCTGATGAACATGATG
GGTACAAGGGCCAAAGACCAACCTTGAGAAATAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               114-304, + strand, RNAz p=0.769552

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               114-304, + strand, RNAz p=0.769552

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-456, gnl|bosTau2|chr4 (52699765-52700216)
               

               
               7-456, gnl|Hg17|chr7 (131925827-131925318)
               

               
               7-456, gnl|Mm7|chr6 (32722229-32721746)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-456, gnl|bosTau2|chr4 (52699765-52700216)
               

               
               7-456, gnl|Hg17|chr7 (131925827-131925318)
               

               
               7-456, gnl|Mm7|chr6 (32722229-32721746)

	7-456, gnl\|bosTau2\|chr4 (52699765-52700216)
	7-456, gnl\|Hg17\|chr7 (131925827-131925318)
	7-456, gnl\|Mm7\|chr6 (32722229-32721746)