Non-Coding RNA Search

Ss1.1-Pig2-99F11.5

Sequence:


               
               TAGCAATTTACATTTTCAAATATAACCTCACCAAGCCAAGAAGTAGGAAGGGTTGGTGTT
GATTATCTACATTTTTTTTTTTAAGATTGGGAAACTGAGGCTACAAAAAGCTAATTGCAA
ACATTCCATTCTCTAAAAAAAATTTTCAGTCTTTCCCCCTGTACTGGGGTTTCTATGTGA
TTAATAGAATTAAAGTGAAAATGACACACATTTCCACATGCCTTGTATGTAAATATTTAT
TAGCAAAGCATTTTAGTGAGAATGAAGATAATTACTAAATGTAAAAATGATTAAAACTTG
GAGCACAATCTAAAGAAGCTCAAATGCTTTCCTTACTACACTTCAGCCTCAGTAATTATC
ATTAGCTGCTTGATAAGATCTTGATTTTGCTACTCTGCTTTAAGGAGAAAACTCTAAATT
AGTCTGCTTGTGCAGCTTTAGGTTGTTGTTTTTAAATTTTTTTTTTTTTAAGGGTTTGGA
AAAATCCAGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGCAATTTACATTTTCAAATATAACCTCACCAAGCCAAGAAGTAGGAAGGGTTGGTGTT
GATTATCTACATTTTTTTTTTTAAGATTGGGAAACTGAGGCTACAAAAAGCTAATTGCAA
ACATTCCATTCTCTAAAAAAAATTTTCAGTCTTTCCCCCTGTACTGGGGTTTCTATGTGA
TTAATAGAATTAAAGTGAAAATGACACACATTTCCACATGCCTTGTATGTAAATATTTAT
TAGCAAAGCATTTTAGTGAGAATGAAGATAATTACTAAATGTAAAAATGATTAAAACTTG
GAGCACAATCTAAAGAAGCTCAAATGCTTTCCTTACTACACTTCAGCCTCAGTAATTATC
ATTAGCTGCTTGATAAGATCTTGATTTTGCTACTCTGCTTTAAGGAGAAAACTCTAAATT
AGTCTGCTTGTGCAGCTTTAGGTTGTTGTTTTTAAATTTTTTTTTTTTTAAGGGTTTGGA
AAAATCCAGGCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               362-476, - strand, RNAz p=0.740616

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               362-476, - strand, RNAz p=0.740616

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-492, gnl|bosTau2|chr23 (12208628-12209112)
               

               
               4-492, gnl|Hg17|chr6 (37729808-37729256)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-492, gnl|bosTau2|chr23 (12208628-12209112)
               

               
               4-492, gnl|Hg17|chr6 (37729808-37729256)

	4-492, gnl\|bosTau2\|chr23 (12208628-12209112)
	4-492, gnl\|Hg17\|chr6 (37729808-37729256)