Non-Coding RNA Search

Ss1.1-Pig3-SRG8001A22.3

Sequence:


               
               GAAGTTCCAGCAATCTTGCGAGTAACTCAACACCAAATCGATGGGCGGCGGAAAATTGCC
CTTTGCCATCACTGCAATTAAGGGTGTGGGGCGAAGATATGCTCATGTGGTGTTGAGGAA
AGCAGACATCGACCTCACCAAGAGGGCCGGGGAGCTCACCGAGGATGAGGTGGAACGTGT
GATCACCATTATGCAGAATCCACGCCAATACAAGATCCCAGACTGGTTCTTAAACAGACA
GAAGGACGTGAAGGACGGGAAATACAGCCAGGTCCTGGCCAACGGTCTATACAACAAACT
CCGTGAAGACCTGGAGCGCCTGAAGAAGATTCGGGCCCACAGGGGGCTGCGCCACTTCTG
GGGACTCCGTGTCCGAGGCCAGCACACCAAGACCACAGGCCGCCGTGGTCGCACTGTGGG
TGTGTCCAAAAAGAAATAATGTGTGGGCTTTGTGTTAATAAATAGTTTATACAGTTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGTTCCAGCAATCTTGCGAGTAACTCAACACCAAATCGATGGGCGGCGGAAAATTGCC
CTTTGCCATCACTGCAATTAAGGGTGTGGGGCGAAGATATGCTCATGTGGTGTTGAGGAA
AGCAGACATCGACCTCACCAAGAGGGCCGGGGAGCTCACCGAGGATGAGGTGGAACGTGT
GATCACCATTATGCAGAATCCACGCCAATACAAGATCCCAGACTGGTTCTTAAACAGACA
GAAGGACGTGAAGGACGGGAAATACAGCCAGGTCCTGGCCAACGGTCTATACAACAAACT
CCGTGAAGACCTGGAGCGCCTGAAGAAGATTCGGGCCCACAGGGGGCTGCGCCACTTCTG
GGGACTCCGTGTCCGAGGCCAGCACACCAAGACCACAGGCCGCCGTGGTCGCACTGTGGG
TGTGTCCAAAAAGAAATAATGTGTGGGCTTTGTGTTAATAAATAGTTTATACAGTTAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|28189799|dbj|BAC56514.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|28189799|dbj|BAC56514.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               26-144, + strand, RNAz p=0.763317

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               26-144, + strand, RNAz p=0.763317

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               26-480, gnl|bosTau2|chr11 (37521260-37520828)
               

               
               26-480, gnl|Mm7|chr8 (105863340-105862879)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-480, gnl|bosTau2|chr11 (37521260-37520828)
               

               
               26-480, gnl|Mm7|chr8 (105863340-105862879)

	26-480, gnl\|bosTau2\|chr11 (37521260-37520828)
	26-480, gnl\|Mm7\|chr8 (105863340-105862879)