Non-Coding RNA Search

Ss1.1-Pig3-SRG8001E23.5

Sequence:


               
               TTCCATCACTTTTGAGAAGGGTTTATTTGATTATTTAATAAGCTAAGA------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------TTAAGTTTATAGTGTAAAACACATATCCGTGAAAGGAGGAAAGGATAT
TCATTCATGTGTCACCTGTCCTTGTTCCCATCCCCACCGAGGAAATAAAACATTGCATTA
AAAAAATAAAACAAAAAACAAAGCCCACCCGTATCCTCCCACCACAATGCCATTTCTTGC
TGGTGCGCTAGGACGGAGAACCCCACTGGAGAAATGGCAGGCCCTGGGCGGGTCCTGGAT
GGCTGGCCCTAAGAGGCCATGAGAGCCTTGGGAGTAATACCCGCCACCCCTCCCTGGCCT
TGTCAGGGCTACAGCCCCAGCAGAGTTGTTAGTCTTTCATCTGCTCTTCACCTGCCCTGC
TACCACAAGCAATTTCCCTGACGTAAACACTGCTTATTATGTATCACTGAGCAGAAAGAT
AGTATTGATCCTTTTCACTGGAATCATGAACCTACCCATAAATCCAGGCCCCCTGAACAG
CTTGATCACCCTGCAGTGCACCCTGAGGTGGAGCGCCTGATGCCTTTTGCAAGAACAACA
CACATTTTGGATTTTTGCCTTGTCAGTTTCAGGTAAAGACCCTCAGAAAACTAGAAACGT
TCTGGCTAACAGGATCCATGGCGTGAGTCTTTTTTTCCCAGACTCTGCCCCTGCCTTGAC
GACCTTTCTTTCCAATCCTCCTGCAGCCACAGAAGACAGCCCCGAGCTGGGCGTCGGTTC
TGAATCGGAGGAAGGAGCTTCCGAGGGGGCATCCAGAACCCGCGCTCACCGCCCGCACAC
TCTGGCCACCCTCACCGGGATTGGAGAGCGCACGCTGCGGTCTCTCACCAACGGGAGCAC
CACTCCTGGGGATGCGGGACGATCGGAGGCCGAGGACACGGAGAGCGCCACTCTGCAGGG
GAACGTGACCGCCGCTGGGGACTCCCACATGGTCTCCAGCTCCCTGGCAGCCTCGCGCAC
CCTCGGAGGTGATGGGACCGGCAGCATCTTTTTGCACATTCTCTCGATTTGCTTGTGGTC
CAGGATAATCCGTTCTCTGTCAGCCCAGGAGGCGCATTACGAGCGCATAGTGAAGGGAAC
TTTCTGGGTTTTCCGACCTCCCCGCCCCCACCCTCCCACACACGCTGCTGCAGAGGCCTC
TGCGGTGCGGTCTGCCAGGATGCCGCCGGCAATAAAGGAGCGCCGCCACGTTGTGGCTTA
GGCCAGTCTCCTGGGAAAGAAATGTCTCATTATACAGCATGGAAAGTTGGGAGGGTTTTC
CTTTTTCCATGTAGGCGTAACAATTGTTCTATTTGGGGTCTTAAGAGCTTTTCAGATACT
AATTTGCTTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCATCACTTTTGAGAAGGGTTTATTTGATTATTTAATAAGCTAAGA------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------TTAAGTTTATAGTGTAAAACACATATCCGTGAAAGGAGGAAAGGATAT
TCATTCATGTGTCACCTGTCCTTGTTCCCATCCCCACCGAGGAAATAAAACATTGCATTA
AAAAAATAAAACAAAAAACAAAGCCCACCCGTATCCTCCCACCACAATGCCATTTCTTGC
TGGTGCGCTAGGACGGAGAACCCCACTGGAGAAATGGCAGGCCCTGGGCGGGTCCTGGAT
GGCTGGCCCTAAGAGGCCATGAGAGCCTTGGGAGTAATACCCGCCACCCCTCCCTGGCCT
TGTCAGGGCTACAGCCCCAGCAGAGTTGTTAGTCTTTCATCTGCTCTTCACCTGCCCTGC
TACCACAAGCAATTTCCCTGACGTAAACACTGCTTATTATGTATCACTGAGCAGAAAGAT
AGTATTGATCCTTTTCACTGGAATCATGAACCTACCCATAAATCCAGGCCCCCTGAACAG
CTTGATCACCCTGCAGTGCACCCTGAGGTGGAGCGCCTGATGCCTTTTGCAAGAACAACA
CACATTTTGGATTTTTGCCTTGTCAGTTTCAGGTAAAGACCCTCAGAAAACTAGAAACGT
TCTGGCTAACAGGATCCATGGCGTGAGTCTTTTTTTCCCAGACTCTGCCCCTGCCTTGAC
GACCTTTCTTTCCAATCCTCCTGCAGCCACAGAAGACAGCCCCGAGCTGGGCGTCGGTTC
TGAATCGGAGGAAGGAGCTTCCGAGGGGGCATCCAGAACCCGCGCTCACCGCCCGCACAC
TCTGGCCACCCTCACCGGGATTGGAGAGCGCACGCTGCGGTCTCTCACCAACGGGAGCAC
CACTCCTGGGGATGCGGGACGATCGGAGGCCGAGGACACGGAGAGCGCCACTCTGCAGGG
GAACGTGACCGCCGCTGGGGACTCCCACATGGTCTCCAGCTCCCTGGCAGCCTCGCGCAC
CCTCGGAGGTGATGGGACCGGCAGCATCTTTTTGCACATTCTCTCGATTTGCTTGTGGTC
CAGGATAATCCGTTCTCTGTCAGCCCAGGAGGCGCATTACGAGCGCATAGTGAAGGGAAC
TTTCTGGGTTTTCCGACCTCCCCGCCCCCACCCTCCCACACACGCTGCTGCAGAGGCCTC
TGCGGTGCGGTCTGCCAGGATGCCGCCGGCAATAAAGGAGCGCCGCCACGTTGTGGCTTA
GGCCAGTCTCCTGGGAAAGAAATGTCTCATTATACAGCATGGAAAGTTGGGAGGGTTTTC
CTTTTTCCATGTAGGCGTAACAATTGTTCTATTTGGGGTCTTAAGAGCTTTTCAGATACT
AATTTGCTTTTA

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

Help | Less info


               
               383-647, gnl|bosTau2|chr1 (38071055-38071324)
               

               
               383-647, gnl|Hg17|chr3 (126216874-126216630)
               


               
               703-1042, gnl|bosTau2|chr1 (38071359-38071708)
               

               
               703-1042, gnl|Hg17|chr3 (126216565-126216207)
               


               
               1063-1368, gnl|bosTau2|chr1 (38071981-38072281)
               

               
               1063-1368, gnl|Hg17|chr3 (126216168-126215848)
               

               
               1063-1368, gnl|Mm7|chr16 (33400228-33400509)

Aligned organism(s): 7 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               383-647, gnl|bosTau2|chr1 (38071055-38071324)
               

               
               383-647, gnl|Hg17|chr3 (126216874-126216630)
               


               
               703-1042, gnl|bosTau2|chr1 (38071359-38071708)
               

               
               703-1042, gnl|Hg17|chr3 (126216565-126216207)
               


               
               1063-1368, gnl|bosTau2|chr1 (38071981-38072281)
               

               
               1063-1368, gnl|Hg17|chr3 (126216168-126215848)
               

               
               1063-1368, gnl|Mm7|chr16 (33400228-33400509)

	383-647, gnl\|bosTau2\|chr1 (38071055-38071324)
	383-647, gnl\|Hg17\|chr3 (126216874-126216630)

	703-1042, gnl\|bosTau2\|chr1 (38071359-38071708)
	703-1042, gnl\|Hg17\|chr3 (126216565-126216207)

	1063-1368, gnl\|bosTau2\|chr1 (38071981-38072281)
	1063-1368, gnl\|Hg17\|chr3 (126216168-126215848)
	1063-1368, gnl\|Mm7\|chr16 (33400228-33400509)