Ss1.1-Pig3-SRG8002D17.3
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CAGCCCTTACCTTCCGTATCCGGCACAATGAACAGAACCTGTCTTTGGCTGATGTGACCC
AGCAAGCTGGACTGGTGAAATCTGAACTGGAAGCACAGACGGGGCTCCAGATCTTGCAGA
CAGGAGTGGGACAGAGGGAGGAGGCGGCCGCCGTCCTTCCCCGACCGGTCCACAGCCCCT
CTCCCATGCGCTCCGTGCTGCTCACTCTGGTGGCCCTGGCGGGTGTGGCCGGGCTGCTCG
TGGCCCTGGCAGTGGCTCTCTGTGTGCGGCAGCATGCCCGGCAGCGGGACAAGGAGCGCC
TGGCCGCCCTGGGACCTGAGGGCGCCCATGGTGACACTACCTTCGAGTACCAGGACCTGT
GCCGCCAGCACATGGCCTCAAAGTCCCTGTTCAACCGGGCAGAGGGTCCACCGGAGCCTT
CTCGGGTGAGCAGCGTGTCCTCGCAGTTCAGCGACGCGGCCCAGGCCAGCCCCAGCTCCC
ACAGCAGCACACCGTCCTGGTGCGAGGAGCCCGCCCAGGCCAACATGGACATCTCCACGG
GACACATGATTCTGGCATACATGGAGGACCATCTGCGGAACCGGGACCGCTTGGCCAAAG
AGTGGCAGGCCCTGTGTGCCTACCAAGCGGAGCCCAACAGCTGTGCCACCGCCCAGGGGG
AGGGCAACATCAAAAAGAACCGCCACCCTGACTTCCTGCCCTATGACCACGCTCGCATCA
AGCTGAAGGTGGAGAGCAGCCCTTCTCGGAGCGATTACATCAACGCCAGCCCCATTATTG |
Blue-coloured subsequences are predicted RNA structures by RNAz
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CAGCCCTTACCTTCCGTATCCGGCACAATGAACAGAACCTGTCTTTGGCTGATGTGACCC
AGCAAGCTGGACTGGTGAAATCTGAACTGGAAGCACAGACGGGGCTCCAGATCTTGCAGA
CAGGAGTGGGACAGAGGGAGGAGGCGGCCGCCGTCCTTCCCCGACCGGTCCACAGCCCCT
CTCCCATGCGCTCCGTGCTGCTCACTCTGGTGGCCCTGGCGGGTGTGGCCGGGCTGCTCG
TGGCCCTGGCAGTGGCTCTCTGTGTGCGGCAGCATGCCCGGCAGCGGGACAAGGAGCGCC
TGGCCGCCCTGGGACCTGAGGGCGCCCATGGTGACACTACCTTCGAGTACCAGGACCTGT
GCCGCCAGCACATGGCCTCAAAGTCCCTGTTCAACCGGGCAGAGGGTCCACCGGAGCCTT
CTCGGGTGAGCAGCGTGTCCTCGCAGTTCAGCGACGCGGCCCAGGCCAGCCCCAGCTCCC
ACAGCAGCACACCGTCCTGGTGCGAGGAGCCCGCCCAGGCCAACATGGACATCTCCACGG
GACACATGATTCTGGCATACATGGAGGACCATCTGCGGAACCGGGACCGCTTGGCCAAAG
AGTGGCAGGCCCTGTGTGCCTACCAAGCGGAGCCCAACAGCTGTGCCACCGCCCAGGGGG
AGGGCAACATCAAAAAGAACCGCCACCCTGACTTCCTGCCCTATGACCACGCTCGCATCA
AGCTGAAGGTGGAGAGCAGCCCTTCTCGGAGCGATTACATCAACGCCAGCCCCATTATTG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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351-555, gnl|bosTau2|chr2 (65235975-65235771) |
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351-555, gnl|canFam2|chr37 (28842276-28842453) |
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351-555, gnl|danRer3|chr6 (9412987-9413194) |
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351-555, gnl|dasNov1|scaffold_6587 (23095-22924) |
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351-555, gnl|echTel1|scaffold_293195 (12828-13002) |
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351-555, gnl|fr1|chrUn (159890126-159890350) |
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351-555, gnl|galGal2|chrUn (158937683-158937841) |
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351-555, gnl|hg17|chr2 (219987436-219987613) |
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351-555, gnl|Hg17|chr2 (219987663-219987459) |
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351-555, gnl|loxAfr1|scaffold_145 (132882-133059) |
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351-555, gnl|mm7|chr1 (75476268-75476445) |
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351-555, gnl|Mm7|chr1 (75476495-75476291) |
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351-555, gnl|monDom2|scaffold_39 (1251911-1251733) |
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351-555, gnl|oryCun1|scaffold_91114 (3697-3518) |
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351-555, gnl|panTro1|chr13 (110151197-110151374) |
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351-555, gnl|rheMac2|chr12 (83151733-83151910) |
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351-555, gnl|rn3|chr9 (74680085-74680262) |
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351-555, gnl|tetNig1|chr2 (13013184-13012983) |
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351-555, gnl|xenTro1|scaffold_31 (2952650-2952484) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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351-555, gnl|bosTau2|chr2 (65235975-65235771) |
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351-555, gnl|canFam2|chr37 (28842276-28842453) |
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351-555, gnl|danRer3|chr6 (9412987-9413194) |
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351-555, gnl|dasNov1|scaffold_6587 (23095-22924) |
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351-555, gnl|echTel1|scaffold_293195 (12828-13002) |
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351-555, gnl|fr1|chrUn (159890126-159890350) |
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351-555, gnl|galGal2|chrUn (158937683-158937841) |
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351-555, gnl|hg17|chr2 (219987436-219987613) |
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351-555, gnl|Hg17|chr2 (219987663-219987459) |
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351-555, gnl|loxAfr1|scaffold_145 (132882-133059) |
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351-555, gnl|mm7|chr1 (75476268-75476445) |
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351-555, gnl|Mm7|chr1 (75476495-75476291) |
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351-555, gnl|monDom2|scaffold_39 (1251911-1251733) |
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351-555, gnl|oryCun1|scaffold_91114 (3697-3518) |
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351-555, gnl|panTro1|chr13 (110151197-110151374) |
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351-555, gnl|rheMac2|chr12 (83151733-83151910) |
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351-555, gnl|rn3|chr9 (74680085-74680262) |
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351-555, gnl|tetNig1|chr2 (13013184-13012983) |
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351-555, gnl|xenTro1|scaffold_31 (2952650-2952484) |
