Ss1.1-Pig3-SRG8002H23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCACATTCCAACTGTGTAAAATATGTGCTGAAAATGATAAAGATGTGAAGATTGAGCCCT GTGGACACCTCATGTGCACATCCTGTCTAACATCTTGGCAGGAATCAGAAGGCCAGGGCT GTCCTTTCTGCCGATGTGAAATTAAAGGTACTGAGCCCATTGTGGTGGATCCGTTTGATC CTAGAGGAAGTGGCAGCCTGTTGAGGCAAGGAGCGGAGGGAGCTCCCTCCCCAAATTATG ATGATGATGATGATGAACGAGCTGATGATTCTCTCTTCATGATGAAGGAATTGGCTTGTG CCAAGGTGGAGCGGCCTCCTTCTCCATTCTCCATGGCCCCACAAGCTTCCCTTCCCCCGG TGCCACCACGGCTTGACCTTCTGCAACAGCGAATATCTATTCCTTCGAGTACTTCCGGTC TTGGAACTGCTTCTAAGGCTCCTTCTGGCTCCCTTCATAAGGACAAACCATTACCAATAC CTCCGACTCTTCGAGATCTCCCACCACCACCCCCTCCAGACCGGCCATATTCTGGTGGAA CAGAGACCCGGCCTCAAAGACGCCCCTTGCCTTGTACACCCGGAGACTGTCCATCCAGAG ACAAACTGCCCCCTGTCCCCTCTAGCCGTGTTGGAGAAGCATCTTGGCTGCCTCGGCCAA TCCCCAAAGTACCAGTAGTTGCCCCAAACCCTGGCGACCCCTGGACAGGGAGAGAATTAA CCAACCGGCACTCACTTCCATTTTCATTGCCCTCACAAATGGAACCCAGAACCGATGTGC CTAGGCTTGGAAGCGCATTCAGCCTGGATACCTCTGTGAATATGAATAGCAGCCCATTAG CAGGTCCAGAGTGTGAGCATCCCAAAATCAAACCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCACATTCCAACTGTGTAAAATATGTGCTGAAAATGATAAAGATGTGAAGATTGAGCCCT GTGGACACCTCATGTGCACATCCTGTCTAACATCTTGGCAGGAATCAGAAGGCCAGGGCT GTCCTTTCTGCCGATGTGAAATTAAAGGTACTGAGCCCATTGTGGTGGATCCGTTTGATC CTAGAGGAAGTGGCAGCCTGTTGAGGCAAGGAGCGGAGGGAGCTCCCTCCCCAAATTATG ATGATGATGATGATGAACGAGCTGATGATTCTCTCTTCATGATGAAGGAATTGGCTTGTG CCAAGGTGGAGCGGCCTCCTTCTCCATTCTCCATGGCCCCACAAGCTTCCCTTCCCCCGG TGCCACCACGGCTTGACCTTCTGCAACAGCGAATATCTATTCCTTCGAGTACTTCCGGTC TTGGAACTGCTTCTAAGGCTCCTTCTGGCTCCCTTCATAAGGACAAACCATTACCAATAC CTCCGACTCTTCGAGATCTCCCACCACCACCCCCTCCAGACCGGCCATATTCTGGTGGAA CAGAGACCCGGCCTCAAAGACGCCCCTTGCCTTGTACACCCGGAGACTGTCCATCCAGAG ACAAACTGCCCCCTGTCCCCTCTAGCCGTGTTGGAGAAGCATCTTGGCTGCCTCGGCCAA TCCCCAAAGTACCAGTAGTTGCCCCAAACCCTGGCGACCCCTGGACAGGGAGAGAATTAA CCAACCGGCACTCACTTCCATTTTCATTGCCCTCACAAATGGAACCCAGAACCGATGTGC CTAGGCTTGGAAGCGCATTCAGCCTGGATACCTCTGTGAATATGAATAGCAGCCCATTAG CAGGTCCAGAGTGTGAGCATCCCAAAATCAAACCAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 133-307, - strand, RNAz p=0.99849 | |
| 640-799, - strand, RNAz p=0.961317 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 133-307, - strand, RNAz p=0.99849 | |
| 640-799, - strand, RNAz p=0.961317 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 94-307, gnl|bosTau2|chr15 (14362116-14362329) | |
| 94-307, gnl|canFam2|chr5 (17630705-17630438) | |
| 94-307, gnl|danRer3|chr15 (26248983-26249236) | |
| 94-307, gnl|dasNov1|scaffold_186030 (3875-4143) | |
| 94-307, gnl|echTel1|scaffold_319025 (86149-85884) | |
| 94-307, gnl|fr1|chrUn (124483270-124483011) | |
| 94-307, gnl|galGal2|chr24 (4118136-4117870) | |
| 94-307, gnl|hg17|chr11 (118654379-118654645) | |
| 94-307, gnl|Hg17|chr11 (118654422-118654635) | |
| 94-307, gnl|mm7|chr9 (44097940-44097674) | |
| 94-307, gnl|Mm7|chr9 (44097895-44097682) | |
| 94-307, gnl|monDom2|scaffold_2 (119270239-119269972) | |
| 94-307, gnl|oryCun1|scaffold_181988 (8310-8576) | |
| 94-307, gnl|panTro1|chr9 (120673671-120673937) | |
| 94-307, gnl|rheMac2|chr14 (117691136-117691402) | |
| 94-307, gnl|rn3|chr8 (47157910-47157647) | |
| 94-307, gnl|tetNig1|chr16 (552452-552189) | |
| 94-307, gnl|xenTro1|scaffold_75 (609728-609980) | |
| 428-814, gnl|bosTau2|chr15 (14368382-14368769) | |
| 428-814, gnl|canFam2|chr5 (17626224-17625962) | |
| 428-814, gnl|danRer3|chr15 (26249739-26249995) | |
| 428-814, gnl|dasNov1|scaffold_6514 (49660-49402) | |
| 428-814, gnl|echTel1|scaffold_319025 (76443-76185) | |
| 428-814, gnl|fr1|chrUn (124482248-124481956) | |
| 428-814, gnl|galGal2|chr24 (4115576-4115326) | |
| 428-814, gnl|hg17|chr11 (118661076-118661338) | |
| 428-814, gnl|Hg17|chr11 (118661098-118661482) | |
| 428-814, gnl|loxAfr1|scaffold_18360 (5357-5097) | |
| 428-814, gnl|mm7|chr9 (44093271-44093009) | |
| 428-814, gnl|Mm7|chr9 (44093247-44092863) | |
| 428-814, gnl|monDom2|scaffold_2 (119263391-119263133) | |
| 428-814, gnl|oryCun1|scaffold_181988 (14171-14433) | |
| 428-814, gnl|panTro1|chr9 (120680850-120681112) | |
| 428-814, gnl|rheMac2|chr14 (117697616-117697878) | |
| 428-814, gnl|rn3|chr8 (47152433-47152171) | |
| 428-814, gnl|tetNig1|chr16 (551446-551187) | |
| 428-814, gnl|xenTro1|scaffold_75 (610547-610791) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 94-307, gnl|bosTau2|chr15 (14362116-14362329) | |
| 94-307, gnl|canFam2|chr5 (17630705-17630438) | |
| 94-307, gnl|danRer3|chr15 (26248983-26249236) | |
| 94-307, gnl|dasNov1|scaffold_186030 (3875-4143) | |
| 94-307, gnl|echTel1|scaffold_319025 (86149-85884) | |
| 94-307, gnl|fr1|chrUn (124483270-124483011) | |
| 94-307, gnl|galGal2|chr24 (4118136-4117870) | |
| 94-307, gnl|hg17|chr11 (118654379-118654645) | |
| 94-307, gnl|Hg17|chr11 (118654422-118654635) | |
| 94-307, gnl|mm7|chr9 (44097940-44097674) | |
| 94-307, gnl|Mm7|chr9 (44097895-44097682) | |
| 94-307, gnl|monDom2|scaffold_2 (119270239-119269972) | |
| 94-307, gnl|oryCun1|scaffold_181988 (8310-8576) | |
| 94-307, gnl|panTro1|chr9 (120673671-120673937) | |
| 94-307, gnl|rheMac2|chr14 (117691136-117691402) | |
| 94-307, gnl|rn3|chr8 (47157910-47157647) | |
| 94-307, gnl|tetNig1|chr16 (552452-552189) | |
| 94-307, gnl|xenTro1|scaffold_75 (609728-609980) | |
| 428-814, gnl|bosTau2|chr15 (14368382-14368769) | |
| 428-814, gnl|canFam2|chr5 (17626224-17625962) | |
| 428-814, gnl|danRer3|chr15 (26249739-26249995) | |
| 428-814, gnl|dasNov1|scaffold_6514 (49660-49402) | |
| 428-814, gnl|echTel1|scaffold_319025 (76443-76185) | |
| 428-814, gnl|fr1|chrUn (124482248-124481956) | |
| 428-814, gnl|galGal2|chr24 (4115576-4115326) | |
| 428-814, gnl|hg17|chr11 (118661076-118661338) | |
| 428-814, gnl|Hg17|chr11 (118661098-118661482) | |
| 428-814, gnl|loxAfr1|scaffold_18360 (5357-5097) | |
| 428-814, gnl|mm7|chr9 (44093271-44093009) | |
| 428-814, gnl|Mm7|chr9 (44093247-44092863) | |
| 428-814, gnl|monDom2|scaffold_2 (119263391-119263133) | |
| 428-814, gnl|oryCun1|scaffold_181988 (14171-14433) | |
| 428-814, gnl|panTro1|chr9 (120680850-120681112) | |
| 428-814, gnl|rheMac2|chr14 (117697616-117697878) | |
| 428-814, gnl|rn3|chr8 (47152433-47152171) | |
| 428-814, gnl|tetNig1|chr16 (551446-551187) | |
| 428-814, gnl|xenTro1|scaffold_75 (610547-610791) |