Non-Coding RNA Search

Ss1.1-Pig3-SRG8003A06.3

Sequence:


               
               CGGCGCTCGGGCGTGAGGCTGGAGACGACGTGCGGGTTGCCGGTGTGGTGCCGGTGGGAG
CTGCGGAAGTGCCTAAGGACATCAAGATACCAACATACACACATGGTCAGTCCAGGCCTT
CTCTAGGAGATGCAAAACTCAGCAAACCAGTAGTCATCGAAATCATAGAAAAAAAAATTG
GGTGGGGTAGAAAAGAAAAGACTTTAAATATATATGGAACACTGACCTTTGGAACAACAG
CTGCTTTCTCTGGAATGTTGACAAACTTCATTTTCAGACATCGCTTCAAGGTCACGCATG
ATGTTTTGAAGACATATGCATCATTGACTGCACTTCCATTTTTGTCTACCATAGTTTCTT
ATAAGCTTCTTGTAACAGATGCTTTGTGTTCAGGTAACATAAGCCAGGAAAATTGTGTTC
TTAGAAGCTCACTGATTGGCATAGCATGTGGTGTTTTATATCCCACTGCTTTGGCTTTTT
CTAAAAATGGACGTCTGGCATTCAAGTATCATACTGTTCCCATGCCACCAAAAGGAAGGG
TTTTACTTTATTGGCTGCTGCTTTGTCATACAGAGATAAAAGCAATGGTGATCCCTCTCA
TCCTTCAGACAACCTTTGGAATATGTCATGGTCTGCAGCACTATGCAATATTTGAAAGTA
CACTTGAGAAAACTGTTCATGAAGATTAACTGAAGAATGAATGGACACTAAATCAGCTGA
ATGAACTTTTTTATAAGGACTCAGGCATTGCTGAAAGAGTTAAAAAAATAGTTCTGGATA
GACAGTTTGTCTCTTTTCCTTTTGCCCAGTATACAGCATGTGCTCAATAAATAGTAAATA
AATGTAAGAAAAAAAGAATTCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGCGCTCGGGCGTGAGGCTGGAGACGACGTGCGGGTTGCCGGTGTGGTGCCGGTGGGAG
CTGCGGAAGTGCCTAAGGACATCAAGATACCAACATACACACATGGTCAGTCCAGGCCTT
CTCTAGGAGATGCAAAACTCAGCAAACCAGTAGTCATCGAAATCATAGAAAAAAAAATTG
GGTGGGGTAGAAAAGAAAAGACTTTAAATATATATGGAACACTGACCTTTGGAACAACAG
CTGCTTTCTCTGGAATGTTGACAAACTTCATTTTCAGACATCGCTTCAAGGTCACGCATG
ATGTTTTGAAGACATATGCATCATTGACTGCACTTCCATTTTTGTCTACCATAGTTTCTT
ATAAGCTTCTTGTAACAGATGCTTTGTGTTCAGGTAACATAAGCCAGGAAAATTGTGTTC
TTAGAAGCTCACTGATTGGCATAGCATGTGGTGTTTTATATCCCACTGCTTTGGCTTTTT
CTAAAAATGGACGTCTGGCATTCAAGTATCATACTGTTCCCATGCCACCAAAAGGAAGGG
TTTTACTTTATTGGCTGCTGCTTTGTCATACAGAGATAAAAGCAATGGTGATCCCTCTCA
TCCTTCAGACAACCTTTGGAATATGTCATGGTCTGCAGCACTATGCAATATTTGAAAGTA
CACTTGAGAAAACTGTTCATGAAGATTAACTGAAGAATGAATGGACACTAAATCAGCTGA
ATGAACTTTTTTATAAGGACTCAGGCATTGCTGAAAGAGTTAAAAAAATAGTTCTGGATA
GACAGTTTGTCTCTTTTCCTTTTGCCCAGTATACAGCATGTGCTCAATAAATAGTAAATA
AATGTAAGAAAAAAAGAATTCCTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61835041|ref|XP_580313.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61835041|ref|XP_580313.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-255, gnl|bosTau2|chr14 (8387701-8387955)
               

               
               1-255, gnl|Hg17|chr9 (73717793-73717549)
               

               
               1-255, gnl|Mm7|chr9 (24842138-24841900)
               


               
               501-846, gnl|bosTau2|chr29 (4322366-4322711)
               

               
               501-846, gnl|Hg17|chr11 (85024733-85025090)
               

               
               501-846, gnl|Mm7|chr7 (86476052-86475710)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-255, gnl|bosTau2|chr14 (8387701-8387955)
               

               
               1-255, gnl|Hg17|chr9 (73717793-73717549)
               

               
               1-255, gnl|Mm7|chr9 (24842138-24841900)
               


               
               501-846, gnl|bosTau2|chr29 (4322366-4322711)
               

               
               501-846, gnl|Hg17|chr11 (85024733-85025090)
               

               
               501-846, gnl|Mm7|chr7 (86476052-86475710)

	1-255, gnl\|bosTau2\|chr14 (8387701-8387955)
	1-255, gnl\|Hg17\|chr9 (73717793-73717549)
	1-255, gnl\|Mm7\|chr9 (24842138-24841900)

	501-846, gnl\|bosTau2\|chr29 (4322366-4322711)
	501-846, gnl\|Hg17\|chr11 (85024733-85025090)
	501-846, gnl\|Mm7\|chr7 (86476052-86475710)