Ss1.1-Pig3-SRG8003C19.5
|
ATGCGAGATGGACTGGTCATCCCACTGGTGGAGCTGTCAGCAAAGCAGGTGGCATTTCAT
ATCCCATTTGAAGTGGTGGAGAAAGTTTACCCCCCAGTGCCTGAGCAGTTACAGCTCCGA
ATTGCTTTTTGGAGCTTCCCTGAGAATGAAGAGGATATTCGCCTGTACTCCTGCCTGGCC
AATGGCAGTGCAGATGAATTCCAGCGAGGGGATCAGCTGTTCCGCATGAGGGCTGTGAAG
GACCCCCTGCAGATAGGGTTCCACCTGAGTGCTACAGTGGTGCCACCTCAGATGGTCCCC
CCTAAAGGGGCCTACAACGTGGCTGTGATGTTTGACCGCTGCCGGGTCACTTCCTGCAGC
TGCACCTGTGGGGCTGGGGCCAAATGGTGCACCCACGTCGTGGCACTCTGTCTCTTCCGA
ATCCACAACGCTTCTGCAGTCTGCCTGCGGGCCCCAGTGTCAGAGTCCCTGTCTCGGCTG
CAGAGGGACCAGCTGCAGAAGTTTGCTCAGTACCTCATCAGTGAACTCCCTCAGCAGATC
CTCCCCACAGCCCAGCGTCTCCTGGATGAACTCCTTTCTTCCCAGTCAACGGCCATCAAT
ACAGTGTGTGGTGCCCCGGACCCCACAGCAGGGCCCTCGGCCTCCGATCAGAGCACTTGG
TATTTGGATGAATCGACACTCACGGACAACATCAAGAAGACACTGCACAAGTTCTGCGGC |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATGCGAGATGGACTGGTCATCCCACTGGTGGAGCTGTCAGCAAAGCAGGTGGCATTTCAT
ATCCCATTTGAAGTGGTGGAGAAAGTTTACCCCCCAGTGCCTGAGCAGTTACAGCTCCGA
ATTGCTTTTTGGAGCTTCCCTGAGAATGAAGAGGATATTCGCCTGTACTCCTGCCTGGCC
AATGGCAGTGCAGATGAATTCCAGCGAGGGGATCAGCTGTTCCGCATGAGGGCTGTGAAG
GACCCCCTGCAGATAGGGTTCCACCTGAGTGCTACAGTGGTGCCACCTCAGATGGTCCCC
CCTAAAGGGGCCTACAACGTGGCTGTGATGTTTGACCGCTGCCGGGTCACTTCCTGCAGC
TGCACCTGTGGGGCTGGGGCCAAATGGTGCACCCACGTCGTGGCACTCTGTCTCTTCCGA
ATCCACAACGCTTCTGCAGTCTGCCTGCGGGCCCCAGTGTCAGAGTCCCTGTCTCGGCTG
CAGAGGGACCAGCTGCAGAAGTTTGCTCAGTACCTCATCAGTGAACTCCCTCAGCAGATC
CTCCCCACAGCCCAGCGTCTCCTGGATGAACTCCTTTCTTCCCAGTCAACGGCCATCAAT
ACAGTGTGTGGTGCCCCGGACCCCACAGCAGGGCCCTCGGCCTCCGATCAGAGCACTTGG
TATTTGGATGAATCGACACTCACGGACAACATCAAGAAGACACTGCACAAGTTCTGCGGC |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
6-161, gnl|bosTau2|chr28 (22929344-22929499) |
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6-161, gnl|canFam2|chr4 (27433710-27433913) |
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6-161, gnl|danRer3|chrUn (160466249-160466434) |
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6-161, gnl|dasNov1|scaffold_34672 (11534-11316) |
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6-161, gnl|echTel1|scaffold_325083 (41366-41155) |
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6-161, gnl|galGal2|chr6 (15112655-15112483) |
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6-161, gnl|hg17|chr10 (75218391-75218595) |
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6-161, gnl|Hg17|chr10 (75218432-75218587) |
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6-161, gnl|mm7|chr14 (18367161-18367355) |
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6-161, gnl|Mm7|chr14 (18367192-18367347) |
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6-161, gnl|monDom2|scaffold_14 (1771934-1772102) |
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6-161, gnl|oryCun1|scaffold_213487 (99487-99275) |
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6-161, gnl|panTro1|chr8 (76423735-76423939) |
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6-161, gnl|rheMac2|chr9 (63232853-63232649) |
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6-161, gnl|rn3|chr15 (3811244-3811051) |
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6-161, gnl|tetNig1|chrUn_random (120582068-120581852) |
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6-161, gnl|xenTro1|scaffold_507 (245881-245699) |
| |
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255-430, gnl|bosTau2|chr28 (22930007-22930182) |
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255-430, gnl|Hg17|chr10 (75219129-75219304) |
|
255-430, gnl|Mm7|chr14 (18368013-18368188) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
6-161, gnl|bosTau2|chr28 (22929344-22929499) |
|
6-161, gnl|canFam2|chr4 (27433710-27433913) |
|
6-161, gnl|danRer3|chrUn (160466249-160466434) |
|
6-161, gnl|dasNov1|scaffold_34672 (11534-11316) |
|
6-161, gnl|echTel1|scaffold_325083 (41366-41155) |
|
6-161, gnl|galGal2|chr6 (15112655-15112483) |
|
6-161, gnl|hg17|chr10 (75218391-75218595) |
|
6-161, gnl|Hg17|chr10 (75218432-75218587) |
|
6-161, gnl|mm7|chr14 (18367161-18367355) |
|
6-161, gnl|Mm7|chr14 (18367192-18367347) |
|
6-161, gnl|monDom2|scaffold_14 (1771934-1772102) |
|
6-161, gnl|oryCun1|scaffold_213487 (99487-99275) |
|
6-161, gnl|panTro1|chr8 (76423735-76423939) |
|
6-161, gnl|rheMac2|chr9 (63232853-63232649) |
|
6-161, gnl|rn3|chr15 (3811244-3811051) |
|
6-161, gnl|tetNig1|chrUn_random (120582068-120581852) |
|
6-161, gnl|xenTro1|scaffold_507 (245881-245699) |
| |
|
255-430, gnl|bosTau2|chr28 (22930007-22930182) |
|
255-430, gnl|Hg17|chr10 (75219129-75219304) |
|
255-430, gnl|Mm7|chr14 (18368013-18368188) |
