Non-Coding RNA Search

Ss1.1-Pig3-SRG8003F05.3

Sequence:


               
               GCGGCTCGAGGTCAAACCAAAGATCACATCGCCGGAGAAGTCGCACAGAGTCACGTCTCC
ATCCAGTGGGTATTCCAGCCAGTCGAACACACCCACAGCTCTCACCCCTGTGCCTGTGTT
TTTAAAATCAGTGTCACCAGCCAATGGGAAGGGGAAGCCCAAGCCCAAGGTGCCAGAAAG
GGAGGGCTCTCTGGTGTCTTCAGTATCCATCTCCTCCTCCTCCACGTCTCTTTCCTCGAA
TACTTCCACGGAAGGGAGTGGAACTCTGAATAAGCTGGATTCGGTGCTGGCATCTCCCCT
GGCTGCTGCTCCTCTCCCCTCTCTTTCATCCGACAGGTCTCCTTTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGGTCAAACCAAAGATCACATCGCCGGAGAAGTCGCACAGAGTCACGTCTCC
ATCCAGTGGGTATTCCAGCCAGTCGAACACACCCACAGCTCTCACCCCTGTGCCTGTGTT
TTTAAAATCAGTGTCACCAGCCAATGGGAAGGGGAAGCCCAAGCCCAAGGTGCCAGAAAG
GGAGGGCTCTCTGGTGTCTTCAGTATCCATCTCCTCCTCCTCCACGTCTCTTTCCTCGAA
TACTTCCACGGAAGGGAGTGGAACTCTGAATAAGCTGGATTCGGTGCTGGCATCTCCCCT
GGCTGCTGCTCCTCTCCCCTCTCTTTCATCCGACAGGTCTCCTTTCCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               170-289, - strand, RNAz p=0.784088

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               170-289, - strand, RNAz p=0.784088

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               11-331, gnl|bosTau2|chr9 (44880953-44880633)
               

               
               11-331, gnl|Hg17|chr6 (138794681-138794355)
               

               
               11-331, gnl|Mm7|chr10 (18248666-18248992)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-331, gnl|bosTau2|chr9 (44880953-44880633)
               

               
               11-331, gnl|Hg17|chr6 (138794681-138794355)
               

               
               11-331, gnl|Mm7|chr10 (18248666-18248992)

	11-331, gnl\|bosTau2\|chr9 (44880953-44880633)
	11-331, gnl\|Hg17\|chr6 (138794681-138794355)
	11-331, gnl\|Mm7\|chr10 (18248666-18248992)