Ss1.1-Pig3-SRG8003L15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCTCGAGCCGGAGCGGGAGGCGCCGGGGACCGGGGCGAGGCGGCCCCCGCCGCCGCCA TGGAAGCAGTGGGACCCGGACCTCCAACTAGCCTGTTTCAGCCACCTCGTCGTCCTGGCC TTGGAACTGTCGGAAAACCAATTCGACTGTTAGCCAATCATTTTCAGGTTCAGATTCCTA AAATAGATGTGTATCATTATGATGTGGATATCAAACCAGAAAAACGGCCTCGTAGAGTCA ACAGGTAAGGATTACAAAGAGTAGACGTCTCTATATATTTAAATACATATAATTTATTTG TTACAAATCATATTGTTCTCAAAATTATTTTTAACATGTAGGCTTTATTTTTCTCTGAGA TGGTAAGTTTCTTTTTTCTAAGATTTTTTTGTTCTTTTTAAAAAACTTTTGTTGGAATAT AGTTGACTTACAACGTTGTGTTAGTTTCAGGTGTACAGCAAAGTGAATCAGTTATGGAGG TACATACATCCATTCTTTTTTCCCCTGTAGGTTATTATAAACAGATGGTAAGTTTCTTAT AGCAGGTTTGCTGTCTCGTGCTAGATTACCCTCCACAGATTCTAGCAGAGTGCTGGATAC ATCGTTGTTCAATCAGTAAGTAAATACTTAATGAATGAAGAAGAAAAGTCACTCTTTCAT TGAAAGGCAGCAGAAATTTATAAAAATAGGTGAAGACATTGGCGTATATGGAAAATACTA CTAGAACTATCTGGAAATTCAGATTTTATTATTGAGTATTGGTATTAGACATGAGAAAAA CATAAGTATAAAGATATCAGGACCATTTTGGGGTATTGAGGAACATAAGCTCAGAGAGAA GTTCTGTTTAATTCTAGCATTATC------------------------CTAAGCACTGTG ATCCATATGACAGCAGTTTGCCAAGAGTGAAGACATAGCCCTATAACAGATACTCTTCCC CCCCCCCGAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCTCGAGCCGGAGCGGGAGGCGCCGGGGACCGGGGCGAGGCGGCCCCCGCCGCCGCCA TGGAAGCAGTGGGACCCGGACCTCCAACTAGCCTGTTTCAGCCACCTCGTCGTCCTGGCC TTGGAACTGTCGGAAAACCAATTCGACTGTTAGCCAATCATTTTCAGGTTCAGATTCCTA AAATAGATGTGTATCATTATGATGTGGATATCAAACCAGAAAAACGGCCTCGTAGAGTCA ACAGGTAAGGATTACAAAGAGTAGACGTCTCTATATATTTAAATACATATAATTTATTTG TTACAAATCATATTGTTCTCAAAATTATTTTTAACATGTAGGCTTTATTTTTCTCTGAGA TGGTAAGTTTCTTTTTTCTAAGATTTTTTTGTTCTTTTTAAAAAACTTTTGTTGGAATAT AGTTGACTTACAACGTTGTGTTAGTTTCAGGTGTACAGCAAAGTGAATCAGTTATGGAGG TACATACATCCATTCTTTTTTCCCCTGTAGGTTATTATAAACAGATGGTAAGTTTCTTAT AGCAGGTTTGCTGTCTCGTGCTAGATTACCCTCCACAGATTCTAGCAGAGTGCTGGATAC ATCGTTGTTCAATCAGTAAGTAAATACTTAATGAATGAAGAAGAAAAGTCACTCTTTCAT TGAAAGGCAGCAGAAATTTATAAAAATAGGTGAAGACATTGGCGTATATGGAAAATACTA CTAGAACTATCTGGAAATTCAGATTTTATTATTGAGTATTGGTATTAGACATGAGAAAAA CATAAGTATAAAGATATCAGGACCATTTTGGGGTATTGAGGAACATAAGCTCAGAGAGAA GTTCTGTTTAATTCTAGCATTATC------------------------CTAAGCACTGTG ATCCATATGACAGCAGTTTGCCAAGAGTGAAGACATAGCCCTATAACAGATACTCTTCCC CCCCCCCGAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 94-249, gnl|bosTau2|chr3 (76984077-76983922) | |
| 94-249, gnl|canFam2|chr15 (9299991-9299837) | |
| 94-249, gnl|danRer3|chr16 (52332828-52332674) | |
| 94-249, gnl|dasNov1|scaffold_4840 (45153-44999) | |
| 94-249, gnl|echTel1|scaffold_105310 (4738-4584) | |
| 94-249, gnl|fr1|chrUn (110389304-110389151) | |
| 94-249, gnl|galGal2|chr23 (3719842-3719688) | |
| 94-249, gnl|hg17|chr1 (36023155-36023309) | |
| 94-249, gnl|Hg17|chr1 (36023154-36023309) | |
| 94-249, gnl|loxAfr1|scaffold_17425 (18824-18670) | |
| 94-249, gnl|mm7|chr4 (125908470-125908316) | |
| 94-249, gnl|Mm7|chr4 (125908469-125908314) | |
| 94-249, gnl|monDom2|scaffold_43 (14356104-14355950) | |
| 94-249, gnl|oryCun1|scaffold_142487 (386-232) | |
| 94-249, gnl|panTro1|chr1 (36852811-36852965) | |
| 94-249, gnl|rheMac2|chr1 (38729690-38729844) | |
| 94-249, gnl|rn3|chr5 (145834660-145834506) | |
| 94-249, gnl|tetNig1|chrUn_random (22556516-22556362) | |
| 94-249, gnl|xenTro1|scaffold_163 (98961-99115) | |
| 298-517, gnl|bosTau2|chr19 (42575448-42575225) | |
| 326-501, gnl|bosTau2|chr11 (41278452-41278276) | |
| 326-501, gnl|canFam2|chrX (36689302-36689374) | |
| 326-501, gnl|dasNov1|scaffold_88575 (989-907) | |
| 326-501, gnl|hg17|chrX (42102389-42102471) | |
| 326-501, gnl|loxAfr1|scaffold_49726 (19548-19468) | |
| 326-501, gnl|mm7|chrX (13061080-13061152) | |
| 326-501, gnl|oryCun1|scaffold_57456 (333-263) | |
| 326-501, gnl|panTro1|chrX (43478465-43478547) | |
| 326-501, gnl|rheMac2|chrX (40247709-40247791) | |
| 326-501, gnl|rn3|chrX (19764565-19764650) | |
| 368-500, gnl|bosTau2|chr10 (38370240-38370370) | |
| 378-499, gnl|bosTau2|chr10 (16830180-16830302) | |
| 523-865, gnl|bosTau2|chr3 (77049669-77049339) | |
| 523-865, gnl|Hg17|chr1 (35951849-35952236) | |
| 523-865, gnl|Mm7|chr4 (125970535-125970241) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 94-249, gnl|bosTau2|chr3 (76984077-76983922) | |
| 94-249, gnl|canFam2|chr15 (9299991-9299837) | |
| 94-249, gnl|danRer3|chr16 (52332828-52332674) | |
| 94-249, gnl|dasNov1|scaffold_4840 (45153-44999) | |
| 94-249, gnl|echTel1|scaffold_105310 (4738-4584) | |
| 94-249, gnl|fr1|chrUn (110389304-110389151) | |
| 94-249, gnl|galGal2|chr23 (3719842-3719688) | |
| 94-249, gnl|hg17|chr1 (36023155-36023309) | |
| 94-249, gnl|Hg17|chr1 (36023154-36023309) | |
| 94-249, gnl|loxAfr1|scaffold_17425 (18824-18670) | |
| 94-249, gnl|mm7|chr4 (125908470-125908316) | |
| 94-249, gnl|Mm7|chr4 (125908469-125908314) | |
| 94-249, gnl|monDom2|scaffold_43 (14356104-14355950) | |
| 94-249, gnl|oryCun1|scaffold_142487 (386-232) | |
| 94-249, gnl|panTro1|chr1 (36852811-36852965) | |
| 94-249, gnl|rheMac2|chr1 (38729690-38729844) | |
| 94-249, gnl|rn3|chr5 (145834660-145834506) | |
| 94-249, gnl|tetNig1|chrUn_random (22556516-22556362) | |
| 94-249, gnl|xenTro1|scaffold_163 (98961-99115) | |
| 298-517, gnl|bosTau2|chr19 (42575448-42575225) | |
| 326-501, gnl|bosTau2|chr11 (41278452-41278276) | |
| 326-501, gnl|canFam2|chrX (36689302-36689374) | |
| 326-501, gnl|dasNov1|scaffold_88575 (989-907) | |
| 326-501, gnl|hg17|chrX (42102389-42102471) | |
| 326-501, gnl|loxAfr1|scaffold_49726 (19548-19468) | |
| 326-501, gnl|mm7|chrX (13061080-13061152) | |
| 326-501, gnl|oryCun1|scaffold_57456 (333-263) | |
| 326-501, gnl|panTro1|chrX (43478465-43478547) | |
| 326-501, gnl|rheMac2|chrX (40247709-40247791) | |
| 326-501, gnl|rn3|chrX (19764565-19764650) | |
| 368-500, gnl|bosTau2|chr10 (38370240-38370370) | |
| 378-499, gnl|bosTau2|chr10 (16830180-16830302) | |
| 523-865, gnl|bosTau2|chr3 (77049669-77049339) | |
| 523-865, gnl|Hg17|chr1 (35951849-35952236) | |
| 523-865, gnl|Mm7|chr4 (125970535-125970241) |