Non-Coding RNA Search

Ss1.1-Pig3-SRG8004A10.5

Sequence:


               
               TTCGGAGTAACA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AAAGTTGGAATTCCTTGGGACGCCGTGCCAACCCAA
TAAGTCGTTCTCAAATGTGCAGCGTCTGCCCAGAAAGCCCGCATTTGGTCTTTGGTTTTC
TTACAGGGTGGCTGGGGAAATAGCAAGCAGCTGAGTCAAGAGAGGACCCGTCCTCGGACG
AAGGAACGCATTTACCTTCCTTCTCAGACACTTGAGTGTTGAGGAGACCATTCATCTAGG
CCATTTCCTTGGCGGTGGCATCTGTGTGACTCTGCAGCTGGCACTTCTGCCTCCACACTG
GCGCTGGGGTTTGGCGGAGACGGTGCTGGACCATTTGCTAACCTTGCCTCTCACTTTGGC
CAGCTGGGGAGAGCGCTGCCCTTCTGCTGCCTGTTTAATGTGTGTTTTTCTCTCTGTTCT
CTGGCTGGCTGCTGCAGCGTTCAAGCTGGAACTGGAGGAGAGGCTGTTTGGGCAGCATCT
GGCCACAGAGGTGCTTCTCAAGGCGCTGACAGGCTTCATGAACAACAAAAACCCCAAGAA
AGCACTGACGCTTTCCTTACACGGCTGGGCTGGCACGGGCAAGAATTTTGTCAGCCAGAT
TGTGGCTGAAAATCTTCACCGGAAAGGCTTGAAGAGCAACTTTGTCCACTTGTTCGTATC
GACTCTGCACTTTCCTCACGAGCAGCACGTAAAACTGTACCAGGACCAGTTACAGAGGTG
GATTCGAGGCAACGTGAGCGCCTGTGCCAACTCTGTGTTCATCTTTGATGAGATGGATAA
GTTGCACCCGGGGATCATTGATGCGATCAAGCCGTTCCTGGATTACTACGAGCAGATTGA
TGGCGTGTCCTACCGGAAAGCTATCTTCATCTTTCTACTTGAAAAGGGCGGGGTTGCCCA
CAGCCCAGCCTCCCCACCCCACAGAAAACGTGGACGAGCTTGAATTGACCTATACCTACT
GAATATAAAATAATAAAGCCTAAATTTTAACATGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCGGAGTAACA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------AAAGTTGGAATTCCTTGGGACGCCGTGCCAACCCAA
TAAGTCGTTCTCAAATGTGCAGCGTCTGCCCAGAAAGCCCGCATTTGGTCTTTGGTTTTC
TTACAGGGTGGCTGGGGAAATAGCAAGCAGCTGAGTCAAGAGAGGACCCGTCCTCGGACG
AAGGAACGCATTTACCTTCCTTCTCAGACACTTGAGTGTTGAGGAGACCATTCATCTAGG
CCATTTCCTTGGCGGTGGCATCTGTGTGACTCTGCAGCTGGCACTTCTGCCTCCACACTG
GCGCTGGGGTTTGGCGGAGACGGTGCTGGACCATTTGCTAACCTTGCCTCTCACTTTGGC
CAGCTGGGGAGAGCGCTGCCCTTCTGCTGCCTGTTTAATGTGTGTTTTTCTCTCTGTTCT
CTGGCTGGCTGCTGCAGCGTTCAAGCTGGAACTGGAGGAGAGGCTGTTTGGGCAGCATCT
GGCCACAGAGGTGCTTCTCAAGGCGCTGACAGGCTTCATGAACAACAAAAACCCCAAGAA
AGCACTGACGCTTTCCTTACACGGCTGGGCTGGCACGGGCAAGAATTTTGTCAGCCAGAT
TGTGGCTGAAAATCTTCACCGGAAAGGCTTGAAGAGCAACTTTGTCCACTTGTTCGTATC
GACTCTGCACTTTCCTCACGAGCAGCACGTAAAACTGTACCAGGACCAGTTACAGAGGTG
GATTCGAGGCAACGTGAGCGCCTGTGCCAACTCTGTGTTCATCTTTGATGAGATGGATAA
GTTGCACCCGGGGATCATTGATGCGATCAAGCCGTTCCTGGATTACTACGAGCAGATTGA
TGGCGTGTCCTACCGGAAAGCTATCTTCATCTTTCTACTTGAAAAGGGCGGGGTTGCCCA
CAGCCCAGCCTCCCCACCCCACAGAAAACGTGGACGAGCTTGAATTGACCTATACCTACT
GAATATAAAATAATAAAGCCTAAATTTTAACATGTG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61836081|ref|XP_613495.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61836081|ref|XP_613495.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               223-692, gnl|bosTau2|chr11 (80380178-80380650)
               

               
               223-692, gnl|Hg17|chr9 (129645707-129646172)
               

               
               223-692, gnl|Mm7|chr2 (30960906-30961329)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               223-692, gnl|bosTau2|chr11 (80380178-80380650)
               

               
               223-692, gnl|Hg17|chr9 (129645707-129646172)
               

               
               223-692, gnl|Mm7|chr2 (30960906-30961329)

	223-692, gnl\|bosTau2\|chr11 (80380178-80380650)
	223-692, gnl\|Hg17\|chr9 (129645707-129646172)
	223-692, gnl\|Mm7\|chr2 (30960906-30961329)