Ss1.1-Pig3-SRG8004K03.5
|
CAAGACACTTACTCAAAGTCACCCAACTAGTAAGCATTCAGCACAGATACCCACCACCAA
AGGGTATGTTCTCCATCCCTCTTGCTTTCTCTGACTGGGAAGAGCCGAGTGTCTGTCACA
TTCACTGAGAGGTGGGAGGGGAGAGGGCTACAGAGAGGGGCTTGGATGCCCCCCATGGCC
ATTATGGCATGTCTCCCAGGGGCCCCCAGGCCTGGCAGTAAATGTGGGCATACCTGCCCC
GCCTCTTGGCTGATTCCCACCCTGTTGCACGCCTAGGTCCAGGACTGAGCTCCCCGGCAC
CATGAACCCTACCATTGGCATCGCTCTCTTGCTAACAGGTACCAGGCGGGCGGCGGGGCT
GGGATTCCAAGCACCCTGGCTTCCTTCCCCTCAGAGAAGCTAGCTTCTTCCACACAACCT
CAGAAGGCAGGGCAACCTGCGGGTGCAGTACGAGTTCAGCCTGACCCGCGAGAAAAATAA
TCACGTGCTCTTGGGCACTGTGGGGGTCCCTGAGCACTCCTACCGCTCTCGAACCAACTT
CTCCAGCAAGTACGACATCAAGGTCCTCTACTTATCAGGCTTCACTACCAAAGATGAGGG
GATCTACGCATGCGAACTCCACCTCTCTGGCCAGACGCCCANCATCTCCAGCAAGAATAT
CTCTGTGTTCAAAGACAAACTGGTCAAGTGTGGGGGCATAAGCCTGCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAAGACACTTACTCAAAGTCACCCAACTAGTAAGCATTCAGCACAGATACCCACCACCAA
AGGGTATGTTCTCCATCCCTCTTGCTTTCTCTGACTGGGAAGAGCCGAGTGTCTGTCACA
TTCACTGAGAGGTGGGAGGGGAGAGGGCTACAGAGAGGGGCTTGGATGCCCCCCATGGCC
ATTATGGCATGTCTCCCAGGGGCCCCCAGGCCTGGCAGTAAATGTGGGCATACCTGCCCC
GCCTCTTGGCTGATTCCCACCCTGTTGCACGCCTAGGTCCAGGACTGAGCTCCCCGGCAC
CATGAACCCTACCATTGGCATCGCTCTCTTGCTAACAGGTACCAGGCGGGCGGCGGGGCT
GGGATTCCAAGCACCCTGGCTTCCTTCCCCTCAGAGAAGCTAGCTTCTTCCACACAACCT
CAGAAGGCAGGGCAACCTGCGGGTGCAGTACGAGTTCAGCCTGACCCGCGAGAAAAATAA
TCACGTGCTCTTGGGCACTGTGGGGGTCCCTGAGCACTCCTACCGCTCTCGAACCAACTT
CTCCAGCAAGTACGACATCAAGGTCCTCTACTTATCAGGCTTCACTACCAAAGATGAGGG
GATCTACGCATGCGAACTCCACCTCTCTGGCCAGACGCCCANCATCTCCAGCAAGAATAT
CTCTGTGTTCAAAGACAAACTGGTCAAGTGTGGGGGCATAAGCCTGCT
|
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gi|5163182|gb|AAD40573.1| |
Protein identifier
|
gi|5163182|gb|AAD40573.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
87-428, gnl|bosTau2|chr15 (14488497-14488164) |
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87-428, gnl|Hg17|chr11 (118797049-118796699) |
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87-428, gnl|Mm7|chr9 (43980137-43980470) |
| |
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446-674, gnl|bosTau2|chr15 (14487658-14487430) |
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446-674, gnl|canFam2|chr5 (17513587-17513366) |
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446-674, gnl|dasNov1|scaffold_43917 (8087-7862) |
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446-674, gnl|galGal2|chr24 (4066680-4066487) |
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446-674, gnl|hg17|chr11 (118795925-118796152) |
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446-674, gnl|Hg17|chr11 (118796199-118795971) |
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446-674, gnl|loxAfr1|scaffold_20313 (33027-32800) |
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446-674, gnl|mm7|chr9 (43981344-43981118) |
|
446-674, gnl|Mm7|chr9 (43981069-43981297) |
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446-674, gnl|monDom2|scaffold_2 (119002953-119002732) |
|
446-674, gnl|panTro1|chr9 (120812974-120813201) |
|
446-674, gnl|rheMac2|chr14 (117819494-117819721) |
|
446-674, gnl|rn3|chr8 (47040037-47039811) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
87-428, gnl|bosTau2|chr15 (14488497-14488164) |
|
87-428, gnl|Hg17|chr11 (118797049-118796699) |
|
87-428, gnl|Mm7|chr9 (43980137-43980470) |
| |
|
446-674, gnl|bosTau2|chr15 (14487658-14487430) |
|
446-674, gnl|canFam2|chr5 (17513587-17513366) |
|
446-674, gnl|dasNov1|scaffold_43917 (8087-7862) |
|
446-674, gnl|galGal2|chr24 (4066680-4066487) |
|
446-674, gnl|hg17|chr11 (118795925-118796152) |
|
446-674, gnl|Hg17|chr11 (118796199-118795971) |
|
446-674, gnl|loxAfr1|scaffold_20313 (33027-32800) |
|
446-674, gnl|mm7|chr9 (43981344-43981118) |
|
446-674, gnl|Mm7|chr9 (43981069-43981297) |
|
446-674, gnl|monDom2|scaffold_2 (119002953-119002732) |
|
446-674, gnl|panTro1|chr9 (120812974-120813201) |
|
446-674, gnl|rheMac2|chr14 (117819494-117819721) |
|
446-674, gnl|rn3|chr8 (47040037-47039811) |
