Ss1.1-Pig3-SRG8004L02.3
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CTTTCTTGCATTGAATGATCTGCCTTTTTCTACTTGATAACTATTAAAGTTTATTGTGGA
GTTTAGAAGGAGCTTATTAGCATTAAAATTTCCACCTGCGGTGAAAGGTAAACCAATTTG
GAATTGATGGTGAATACTTTTGAAATATTGGAGCAAGGATTAATGAGTAATAGCCATTTC
CACCCAAAGCAAGACTCCTTTATTGGGCAGTCTTTGCTCTGAATTTGCTTGTTTGCCTGA
CAGGGACATTATCATGTCTCCTGATTCCCCCTACTCAATCTTTGTTCTTCACTTTTCTCC
CAGGTGCTGGATGCTGTTTCCTGATAAACCTTTTGCACTCCTCACTTGATCTTGGTATCT
GCTTTCAGAGAACCAAACAGTTACACAGCCTCTAATATTTAATGGCATAACTTCAGGGTC
TCTGAAGTGTAGGAAAGAAGTTTTGTCTAGATGTGTTATATATTTTTTCCATGTTGAGAA
ATACTCTTTTAAAAATAGAAATAAAATTAAATATTGGAGGACTTCATGTGTTTAAGACAC
TGCTCTAAGAACTGTGGGGAAATATAACTTAGGTTTACAAAATTGATACTTTTAAGAATT
GTTTTGATTGGAAGTCAAGGCACAAATATCTGAAAAATCAAGTGTAAGCCACCAGGGTAA
AAAAAGTCACAAAAAATTCATTGTTGAGAAAATAATAGTTTGCATGTGTAGAAGAGAACT
CATAAGAATATTTTTTTTTGCTTTGAATTTTAGTAATCCTCCCCAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CTTTCTTGCATTGAATGATCTGCCTTTTTCTACTTGATAACTATTAAAGTTTATTGTGGA
GTTTAGAAGGAGCTTATTAGCATTAAAATTTCCACCTGCGGTGAAAGGTAAACCAATTTG
GAATTGATGGTGAATACTTTTGAAATATTGGAGCAAGGATTAATGAGTAATAGCCATTTC
CACCCAAAGCAAGACTCCTTTATTGGGCAGTCTTTGCTCTGAATTTGCTTGTTTGCCTGA
CAGGGACATTATCATGTCTCCTGATTCCCCCTACTCAATCTTTGTTCTTCACTTTTCTCC
CAGGTGCTGGATGCTGTTTCCTGATAAACCTTTTGCACTCCTCACTTGATCTTGGTATCT
GCTTTCAGAGAACCAAACAGTTACACAGCCTCTAATATTTAATGGCATAACTTCAGGGTC
TCTGAAGTGTAGGAAAGAAGTTTTGTCTAGATGTGTTATATATTTTTTCCATGTTGAGAA
ATACTCTTTTAAAAATAGAAATAAAATTAAATATTGGAGGACTTCATGTGTTTAAGACAC
TGCTCTAAGAACTGTGGGGAAATATAACTTAGGTTTACAAAATTGATACTTTTAAGAATT
GTTTTGATTGGAAGTCAAGGCACAAATATCTGAAAAATCAAGTGTAAGCCACCAGGGTAA
AAAAAGTCACAAAAAATTCATTGTTGAGAAAATAATAGTTTGCATGTGTAGAAGAGAACT
CATAAGAATATTTTTTTTTGCTTTGAATTTTAGTAATCCTCCCCAAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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2-300, gnl|bosTau2|chr1 (32902990-32902680) |
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2-300, gnl|Hg17|chr3 (112314383-112314907) |
| |
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324-767, gnl|bosTau2|chr1 (32902676-32902239) |
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324-767, gnl|canFam2|chr33 (18953249-18953576) |
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324-767, gnl|dasNov1|scaffold_94532 (7864-8176) |
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324-767, gnl|echTel1|scaffold_301132 (3274-3629) |
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324-767, gnl|hg17|chr3 (112314863-112315176) |
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324-767, gnl|Hg17|chr3 (112314911-112315630) |
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324-767, gnl|panTro1|chr2 (113903174-113903490) |
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324-767, gnl|rheMac2|chr2 (31238239-31238555) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-300, gnl|bosTau2|chr1 (32902990-32902680) |
|
2-300, gnl|Hg17|chr3 (112314383-112314907) |
| |
|
324-767, gnl|bosTau2|chr1 (32902676-32902239) |
|
324-767, gnl|canFam2|chr33 (18953249-18953576) |
|
324-767, gnl|dasNov1|scaffold_94532 (7864-8176) |
|
324-767, gnl|echTel1|scaffold_301132 (3274-3629) |
|
324-767, gnl|hg17|chr3 (112314863-112315176) |
|
324-767, gnl|Hg17|chr3 (112314911-112315630) |
|
324-767, gnl|panTro1|chr2 (113903174-113903490) |
|
324-767, gnl|rheMac2|chr2 (31238239-31238555) |
