Ss1.1-Pig3-SRG8005K05.5
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GAACATCATTTTGGGATTAACAAACCAGAGAAGATGTACCATCTCCTGATGATTCGAAGT
TTCTGTTGAAGACCTTTACACATATTAAATCTAATGTGTCTGCGCCTAATAAAAAGAAAG
TTAAAGAAAGTAAAGAAAAGGAGAGGTTGGAGAGAAGATTACTTGAGGAGTTGCTGAAGA
TGTTCATGGACTCCGAATCTTTTTACTATAGCTTGACCTATGACCTGACCAATTCGGTGC
AGAGCAAAGTGGGGGGGAAAAGGG------------CCCTCTGGCAAAAGGTTGATGACC
GATTTTTTTGGAATAAATATATGATACAAGACCTTACTGAGATTGGTACACCGGATGTGG
ACTTTTGGATTATCCCCATTATCCAAGGTTTTGTACAGATTGAGGAACTTGTGGTTAATT
ATAATGAGTCATCTGATGATGATAAAAGCAGCCCGGAGACTCCCTCTCATGAGTCCACCT
GCGTAGATGACATTCACCCACGATTTCTGGTGGCCCTCATTTCACGCCGCAGTAGGCACA
GAGCANGAATGCGTTATAAACGAAGAGGAGTGGATAAAAATGGAAATGTTGCAAATTATG
TGGAGACTGAGCAATTAATTCACGTGCATAATCATA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GAACATCATTTTGGGATTAACAAACCAGAGAAGATGTACCATCTCCTGATGATTCGAAGT
TTCTGTTGAAGACCTTTACACATATTAAATCTAATGTGTCTGCGCCTAATAAAAAGAAAG
TTAAAGAAAGTAAAGAAAAGGAGAGGTTGGAGAGAAGATTACTTGAGGAGTTGCTGAAGA
TGTTCATGGACTCCGAATCTTTTTACTATAGCTTGACCTATGACCTGACCAATTCGGTGC
AGAGCAAAGTGGGGGGGAAAAGGG------------CCCTCTGGCAAAAGGTTGATGACC
GATTTTTTTGGAATAAATATATGATACAAGACCTTACTGAGATTGGTACACCGGATGTGG
ACTTTTGGATTATCCCCATTATCCAAGGTTTTGTACAGATTGAGGAACTTGTGGTTAATT
ATAATGAGTCATCTGATGATGATAAAAGCAGCCCGGAGACTCCCTCTCATGAGTCCACCT
GCGTAGATGACATTCACCCACGATTTCTGGTGGCCCTCATTTCACGCCGCAGTAGGCACA
GAGCANGAATGCGTTATAAACGAAGAGGAGTGGATAAAAATGGAAATGTTGCAAATTATG
TGGAGACTGAGCAATTAATTCACGTGCATAATCATA
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gi|55958129|emb|CAI16958.1| |
Protein identifier
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gi|55958129|emb|CAI16958.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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120-280, gnl|bosTau2|chr26 (25355492-25355326) |
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120-280, gnl|canFam2|chr28 (32908159-32908299) |
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120-280, gnl|danRer3|chr13 (25917996-25917863) |
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120-280, gnl|dasNov1|scaffold_1871 (81325-81185) |
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120-280, gnl|echTel1|scaffold_318859 (2989-2849) |
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120-280, gnl|fr1|chrUn (195603561-195603428) |
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120-280, gnl|galGal2|chr6 (29365208-29365348) |
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120-280, gnl|hg17|chr10 (121541362-121541502) |
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120-280, gnl|Hg17|chr10 (121541371-121541540) |
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120-280, gnl|loxAfr1|scaffold_6579 (54122-54262) |
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120-280, gnl|mm7|chr7 (124760567-124760707) |
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120-280, gnl|Mm7|chr7 (124760576-124760745) |
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120-280, gnl|monDom2|scaffold_14 (40355785-40355626) |
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120-280, gnl|panTro1|chr8 (123804115-123804255) |
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120-280, gnl|rheMac2|chr9 (119420865-119421005) |
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120-280, gnl|rn3|chr1 (188065793-188065933) |
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120-280, gnl|tetNig1|chr17 (925286-925153) |
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120-280, gnl|xenTro1|scaffold_337 (978505-978645) |
| |
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336-535, gnl|bosTau2|chr26 (25354025-25353826) |
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336-535, gnl|Hg17|chr10 (121546217-121546416) |
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336-535, gnl|Mm7|chr7 (124764196-124764395) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
120-280, gnl|bosTau2|chr26 (25355492-25355326) |
|
120-280, gnl|canFam2|chr28 (32908159-32908299) |
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120-280, gnl|danRer3|chr13 (25917996-25917863) |
|
120-280, gnl|dasNov1|scaffold_1871 (81325-81185) |
|
120-280, gnl|echTel1|scaffold_318859 (2989-2849) |
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120-280, gnl|fr1|chrUn (195603561-195603428) |
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120-280, gnl|galGal2|chr6 (29365208-29365348) |
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120-280, gnl|hg17|chr10 (121541362-121541502) |
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120-280, gnl|Hg17|chr10 (121541371-121541540) |
|
120-280, gnl|loxAfr1|scaffold_6579 (54122-54262) |
|
120-280, gnl|mm7|chr7 (124760567-124760707) |
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120-280, gnl|Mm7|chr7 (124760576-124760745) |
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120-280, gnl|monDom2|scaffold_14 (40355785-40355626) |
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120-280, gnl|panTro1|chr8 (123804115-123804255) |
|
120-280, gnl|rheMac2|chr9 (119420865-119421005) |
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120-280, gnl|rn3|chr1 (188065793-188065933) |
|
120-280, gnl|tetNig1|chr17 (925286-925153) |
|
120-280, gnl|xenTro1|scaffold_337 (978505-978645) |
| |
|
336-535, gnl|bosTau2|chr26 (25354025-25353826) |
|
336-535, gnl|Hg17|chr10 (121546217-121546416) |
|
336-535, gnl|Mm7|chr7 (124764196-124764395) |
