Non-Coding RNA Search

Ss1.1-Pig3-SRG8006B21.5

Sequence:


               
               GTGACCACCTCATCATAGAGGCACACACGGTGGTTTCAGATGCCTTGGCAAAGGCTGTGG
CTGAGAAGTTATTTGCGGAGATTCTGCAGCCCCAGCTCCTACACGTGTAAGTTCTGTCCA
GTTCTCTCGGGCGTGGCTGTGGGCTGGGCGATCCGCCTACCCCACCAAGCCCCTTCCTGT
GCCTGAGGCCAGCGGCCTCCTTGGCCAGAGTCCTGGGAGTCGCTGGGCCCTATGGTTGAA
GTCTGCCACGCCTTCCCCCTGACATACTCATGGCTCATAGCCATGTGGGCTAACAAAGGC
CTCCCGCCCTTGGACTCCAGGACCTCTGGAGGGATGGGGAGTGATCAGAGAAATGCCAGC
TGAAGATGTAAGGAAACGAGAAGAGGGTTCTGCCCTACCCCGTTCCCTTCACTCCCAGCT
GCTACTCTGGTGTCCCCTGCCCCGCCTGGCTCAGCGTGCTCTCCCTGTAGGTCTGAACAG
AGTGTCCTGACCTCCACCGCCCTGTTCACGGCCATGCTGCACCAGCTCTGCTCCCCTGCC
CTGCTGCGAGAGGCCGTGGCCTTCCTCCTGGGCAAGGACCAGCAGCCTGCAGCCCCCGAG
GACAGCCCCCACACCCTGTGCGCCCACCTCATCAAGCACTGTGACCACCTCTCAGATGAG
GTGAGGGGGGAGGGCCCTCTTCTCCACTCGTACCACCCTGCCCCTGCCCAAGCAAGTTCC
TGAGCGCTTTTTCCCATTTTCATTAGCTTACTAGATGGTTCTTTTTGAGGCATTGAAACC
CAGCCCCCCCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGACCACCTCATCATAGAGGCACACACGGTGGTTTCAGATGCCTTGGCAAAGGCTGTGG
CTGAGAAGTTATTTGCGGAGATTCTGCAGCCCCAGCTCCTACACGTGTAAGTTCTGTCCA
GTTCTCTCGGGCGTGGCTGTGGGCTGGGCGATCCGCCTACCCCACCAAGCCCCTTCCTGT
GCCTGAGGCCAGCGGCCTCCTTGGCCAGAGTCCTGGGAGTCGCTGGGCCCTATGGTTGAA
GTCTGCCACGCCTTCCCCCTGACATACTCATGGCTCATAGCCATGTGGGCTAACAAAGGC
CTCCCGCCCTTGGACTCCAGGACCTCTGGAGGGATGGGGAGTGATCAGAGAAATGCCAGC
TGAAGATGTAAGGAAACGAGAAGAGGGTTCTGCCCTACCCCGTTCCCTTCACTCCCAGCT
GCTACTCTGGTGTCCCCTGCCCCGCCTGGCTCAGCGTGCTCTCCCTGTAGGTCTGAACAG
AGTGTCCTGACCTCCACCGCCCTGTTCACGGCCATGCTGCACCAGCTCTGCTCCCCTGCC
CTGCTGCGAGAGGCCGTGGCCTTCCTCCTGGGCAAGGACCAGCAGCCTGCAGCCCCCGAG
GACAGCCCCCACACCCTGTGCGCCCACCTCATCAAGCACTGTGACCACCTCTCAGATGAG
GTGAGGGGGGAGGGCCCTCTTCTCCACTCGTACCACCCTGCCCCTGCCCAAGCAAGTTCC
TGAGCGCTTTTTCCCATTTTCATTAGCTTACTAGATGGTTCTTTTTGAGGCATTGAAACC
CAGCCCCCCCCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               573-732, - strand, RNAz p=0.959933

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               573-732, - strand, RNAz p=0.959933

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               20-788, gnl|bosTau2|chr8 (31491136-31490384)
               

               
               20-788, gnl|Hg17|chr8 (22012731-22013464)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-788, gnl|bosTau2|chr8 (31491136-31490384)
               

               
               20-788, gnl|Hg17|chr8 (22012731-22013464)

	20-788, gnl\|bosTau2\|chr8 (31491136-31490384)
	20-788, gnl\|Hg17\|chr8 (22012731-22013464)