Ss1.1-Pig3-SRG8006C17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCATCAACCTATCATAATCATCCTGGCAGCTCTGAGGCAGTCTCACCTGGAGACATGGA TGCAGGTTCTGCCAGCTGGGGTGCTGTGTCTTCGTTAAATGATGTTTCAAATCACACGCT TTCTTTAAGACCAGTACCTGGTGCTGTAGTTTATTCAAGTTCAACTGTTCCTGAAAAATC AAAGCCATCACCACAAAAGGATCAAGCTCTATGTGATGGCATTGCTCCTCCACAGAAAGT TCTTTTTCCATCTGAGAAGATTTGTCTTAAGTGGCAGCAAACTCATAGAGTATGAGCTGG GCTCCATAATCTGGGCAATACCTGTTTTGCCAACGCAGCACTGCAGTGTTTAACATACAC GCCACCTCTCGCCAATTACATGCTATCACACGAACACTCCAAGACATGTCATGCAGAAAG ATTTTGTATGATGTGTACCATGCAAGCACATATCACCCATGCACTCAGCAATCCTGGGGA TGTCATTAAACCGATGTTTGTCATTAATGAGATGCGGCGTATCGCCAGGCACTTCCGCTT TGGAAACCAAGAAGATGCCCATGAATTCCTTCAGTACACTGTTGATGCTATGCAGAAAGC GTGCTTGAACGGCAGCAATAAATTAGACAGACATACTCAGGCTACCACACTCGTTTGTCA GATATTTGGAGGATACCTAAGATCTAGAGTCAAATGTTTAAATTGCAAAGGTGTTTCAGA TACTTTTGATCCATATCTCGATATAACATTGGAAATTAAGGCTGCTCAGAGCGTCACCAA GGCATTGGAGCAGTTTGTGAAGCCGGAACAGCTTGATGGAGAAAACTCTTACAAGTGCAG CAAATGTAAAAAGATGGTTCCAGCTTCAAAGAGGTTCACTATACACAGATCCTCTAATGT TCTGACACTTTCTCTGAAACGTTTTGCAAATTTTACTGGTGGAAAAATTGCTAAGGATGT GAAATATCCGGAGTATCTCGATATCCGACCATACATGTCTCAGCCAAATGGCGAACCGAT TGTCTACGTCTTGTATGCAGTGCTGGTGCACACTGGTTTTAATTGCCATGCTGGCCATTA CTTCTGCTACATAAAAGCTAGCAATGGCCTCTGGTACCAAATGAATGACTCCATCGTATC CACCAGTGACATTAGATCGGTACTCAGCCAACAAGCCTATGTTCTCTTTTACATCAGGTC CCACGATGTGAAGAACGGAGGCGACCTTACTCATTCCGCCCACAGCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCATCAACCTATCATAATCATCCTGGCAGCTCTGAGGCAGTCTCACCTGGAGACATGGA TGCAGGTTCTGCCAGCTGGGGTGCTGTGTCTTCGTTAAATGATGTTTCAAATCACACGCT TTCTTTAAGACCAGTACCTGGTGCTGTAGTTTATTCAAGTTCAACTGTTCCTGAAAAATC AAAGCCATCACCACAAAAGGATCAAGCTCTATGTGATGGCATTGCTCCTCCACAGAAAGT TCTTTTTCCATCTGAGAAGATTTGTCTTAAGTGGCAGCAAACTCATAGAGTATGAGCTGG GCTCCATAATCTGGGCAATACCTGTTTTGCCAACGCAGCACTGCAGTGTTTAACATACAC GCCACCTCTCGCCAATTACATGCTATCACACGAACACTCCAAGACATGTCATGCAGAAAG ATTTTGTATGATGTGTACCATGCAAGCACATATCACCCATGCACTCAGCAATCCTGGGGA TGTCATTAAACCGATGTTTGTCATTAATGAGATGCGGCGTATCGCCAGGCACTTCCGCTT TGGAAACCAAGAAGATGCCCATGAATTCCTTCAGTACACTGTTGATGCTATGCAGAAAGC GTGCTTGAACGGCAGCAATAAATTAGACAGACATACTCAGGCTACCACACTCGTTTGTCA GATATTTGGAGGATACCTAAGATCTAGAGTCAAATGTTTAAATTGCAAAGGTGTTTCAGA TACTTTTGATCCATATCTCGATATAACATTGGAAATTAAGGCTGCTCAGAGCGTCACCAA GGCATTGGAGCAGTTTGTGAAGCCGGAACAGCTTGATGGAGAAAACTCTTACAAGTGCAG CAAATGTAAAAAGATGGTTCCAGCTTCAAAGAGGTTCACTATACACAGATCCTCTAATGT TCTGACACTTTCTCTGAAACGTTTTGCAAATTTTACTGGTGGAAAAATTGCTAAGGATGT GAAATATCCGGAGTATCTCGATATCCGACCATACATGTCTCAGCCAAATGGCGAACCGAT TGTCTACGTCTTGTATGCAGTGCTGGTGCACACTGGTTTTAATTGCCATGCTGGCCATTA CTTCTGCTACATAAAAGCTAGCAATGGCCTCTGGTACCAAATGAATGACTCCATCGTATC CACCAGTGACATTAGATCGGTACTCAGCCAACAAGCCTATGTTCTCTTTTACATCAGGTC CCACGATGTGAAGAACGGAGGCGACCTTACTCATTCCGCCCACAGCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 405-521, gnl|bosTau2|chr25 (36646555-36646671) | |
| 405-521, gnl|canFam2|chr6 (14545100-14545229) | |
| 405-521, gnl|danRer3|chr16 (13581165-13581292) | |
| 405-521, gnl|echTel1|scaffold_302342 (430-559) | |
| 405-521, gnl|fr1|chrUn (189886661-189886530) | |
| 405-521, gnl|galGal2|chr14 (3158996-3158867) | |
| 405-521, gnl|hg17|chr7 (5948702-5948831) | |
| 405-521, gnl|Hg17|chr7 (5948710-5948826) | |
| 405-521, gnl|loxAfr1|scaffold_194063 (513-642) | |
| 405-521, gnl|mm7|chr5 (142756296-142756168) | |
| 405-521, gnl|Mm7|chr5 (142756287-142756171) | |
| 405-521, gnl|monDom2|scaffold_19 (43538564-43538435) | |
| 405-521, gnl|oryCun1|scaffold_76457 (862-735) | |
| 405-521, gnl|panTro1|chr6 (6852753-6852624) | |
| 405-521, gnl|rheMac2|chr3 (44322981-44323110) | |
| 405-521, gnl|rn3|chr12 (11185463-11185591) | |
| 405-521, gnl|tetNig1|chr2 (3953674-3953805) | |
| 405-521, gnl|xenTro1|scaffold_6 (2699155-2699284) | |
| 548-1133, gnl|bosTau2|chr4 (67812012-67812597) | |
| 548-1133, gnl|Hg17|chr4 (9046340-9046925) | |
| 548-1133, gnl|Mm7|chr7 (100825830-100825245) | |
| 954-1097, gnl|bosTau2|chr25 (36653336-36653479) | |
| 954-1097, gnl|canFam2|chr6 (14552128-14552307) | |
| 954-1097, gnl|danRer3|chr16 (13582659-13582828) | |
| 954-1097, gnl|dasNov1|scaffold_18185 (15665-15498) | |
| 954-1097, gnl|echTel1|scaffold_302342 (8456-8646) | |
| 954-1097, gnl|fr1|chrUn (189885166-189884979) | |
| 954-1097, gnl|galGal2|chr14 (3155121-3154935) | |
| 954-1097, gnl|hg17|chr7 (5958371-5958561) | |
| 954-1097, gnl|Hg17|chr7 (5958386-5958529) | |
| 954-1097, gnl|loxAfr1|scaffold_181722 (709-836) | |
| 954-1097, gnl|mm7|chr5 (142752165-142751988) | |
| 954-1097, gnl|Mm7|chr5 (142752148-142752005) | |
| 954-1097, gnl|monDom2|scaffold_19 (43527664-43527476) | |
| 954-1097, gnl|oryCun1|scaffold_186702 (4723-4557) | |
| 954-1097, gnl|panTro1|chr6 (6843053-6842863) | |
| 954-1097, gnl|rheMac2|chr3 (44333300-44333490) | |
| 954-1097, gnl|rn3|chr12 (11189776-11189951) | |
| 954-1097, gnl|tetNig1|chr2 (3955147-3955312) | |
| 954-1097, gnl|xenTro1|scaffold_6 (2705747-2705923) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 405-521, gnl|bosTau2|chr25 (36646555-36646671) | |
| 405-521, gnl|canFam2|chr6 (14545100-14545229) | |
| 405-521, gnl|danRer3|chr16 (13581165-13581292) | |
| 405-521, gnl|echTel1|scaffold_302342 (430-559) | |
| 405-521, gnl|fr1|chrUn (189886661-189886530) | |
| 405-521, gnl|galGal2|chr14 (3158996-3158867) | |
| 405-521, gnl|hg17|chr7 (5948702-5948831) | |
| 405-521, gnl|Hg17|chr7 (5948710-5948826) | |
| 405-521, gnl|loxAfr1|scaffold_194063 (513-642) | |
| 405-521, gnl|mm7|chr5 (142756296-142756168) | |
| 405-521, gnl|Mm7|chr5 (142756287-142756171) | |
| 405-521, gnl|monDom2|scaffold_19 (43538564-43538435) | |
| 405-521, gnl|oryCun1|scaffold_76457 (862-735) | |
| 405-521, gnl|panTro1|chr6 (6852753-6852624) | |
| 405-521, gnl|rheMac2|chr3 (44322981-44323110) | |
| 405-521, gnl|rn3|chr12 (11185463-11185591) | |
| 405-521, gnl|tetNig1|chr2 (3953674-3953805) | |
| 405-521, gnl|xenTro1|scaffold_6 (2699155-2699284) | |
| 548-1133, gnl|bosTau2|chr4 (67812012-67812597) | |
| 548-1133, gnl|Hg17|chr4 (9046340-9046925) | |
| 548-1133, gnl|Mm7|chr7 (100825830-100825245) | |
| 954-1097, gnl|bosTau2|chr25 (36653336-36653479) | |
| 954-1097, gnl|canFam2|chr6 (14552128-14552307) | |
| 954-1097, gnl|danRer3|chr16 (13582659-13582828) | |
| 954-1097, gnl|dasNov1|scaffold_18185 (15665-15498) | |
| 954-1097, gnl|echTel1|scaffold_302342 (8456-8646) | |
| 954-1097, gnl|fr1|chrUn (189885166-189884979) | |
| 954-1097, gnl|galGal2|chr14 (3155121-3154935) | |
| 954-1097, gnl|hg17|chr7 (5958371-5958561) | |
| 954-1097, gnl|Hg17|chr7 (5958386-5958529) | |
| 954-1097, gnl|loxAfr1|scaffold_181722 (709-836) | |
| 954-1097, gnl|mm7|chr5 (142752165-142751988) | |
| 954-1097, gnl|Mm7|chr5 (142752148-142752005) | |
| 954-1097, gnl|monDom2|scaffold_19 (43527664-43527476) | |
| 954-1097, gnl|oryCun1|scaffold_186702 (4723-4557) | |
| 954-1097, gnl|panTro1|chr6 (6843053-6842863) | |
| 954-1097, gnl|rheMac2|chr3 (44333300-44333490) | |
| 954-1097, gnl|rn3|chr12 (11189776-11189951) | |
| 954-1097, gnl|tetNig1|chr2 (3955147-3955312) | |
| 954-1097, gnl|xenTro1|scaffold_6 (2705747-2705923) |