Non-Coding RNA Search

Ss1.1-Pig3-SRG8006D08.3

Sequence:


               
               TTGGCCGAGACCTGAGTGGCTTCCCTGCACCTCCTGGAGAAGAGCCTCCCGCCTGAACCA
TCGCCTGGCACCCTGCTCCCAGCCCTACCCACTTTCCCTTGTCCTGGGGTGGTGGTTCCA
GAGGCTTGGGGGCCAATCTGGTTCCATTTTCCCTAGCTCTCGCCTCCTCTCCCTTGCCCT
CTCTCCCCTCCTCTAGCTGAGGTGTGGCCCCTGATCTGGTGCTGCCTTGAAGGGGTGGGA
GCAGGAGAGTGTGGAGGACTGGGGTGGGGGTGGACTCTGGGTGGGGCCTGCACACGATGA
CTGGAGGGTTGCCGGGAGCGAAGGCCCTGTCTAGACTGTGTACAGGCCTCGGCGAGGGGA
GGCCCGGACAGGCTAATGGCTAATAAACTGCCCGCTGACTAGTGAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGCCGAGACCTGAGTGGCTTCCCTGCACCTCCTGGAGAAGAGCCTCCCGCCTGAACCA
TCGCCTGGCACCCTGCTCCCAGCCCTACCCACTTTCCCTTGTCCTGGGGTGGTGGTTCCA
GAGGCTTGGGGGCCAATCTGGTTCCATTTTCCCTAGCTCTCGCCTCCTCTCCCTTGCCCT
CTCTCCCCTCCTCTAGCTGAGGTGTGGCCCCTGATCTGGTGCTGCCTTGAAGGGGTGGGA
GCAGGAGAGTGTGGAGGACTGGGGTGGGGGTGGACTCTGGGTGGGGCCTGCACACGATGA
CTGGAGGGTTGCCGGGAGCGAAGGCCCTGTCTAGACTGTGTACAGGCCTCGGCGAGGGGA
GGCCCGGACAGGCTAATGGCTAATAAACTGCCCGCTGACTAGTGAGAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               40-258, - strand, RNAz p=0.826602

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-258, - strand, RNAz p=0.826602

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               167-298, + strand, RNAmicro p=0.988522

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               167-298, + strand, RNAmicro p=0.988522

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-404, gnl|bosTau2|chr10 (11837453-11837856)
               

               
               1-404, gnl|Hg17|chr14 (23916696-23917102)
               

               
               1-404, gnl|Mm7|chr14 (50700922-50701296)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-404, gnl|bosTau2|chr10 (11837453-11837856)
               

               
               1-404, gnl|Hg17|chr14 (23916696-23917102)
               

               
               1-404, gnl|Mm7|chr14 (50700922-50701296)

	1-404, gnl\|bosTau2\|chr10 (11837453-11837856)
	1-404, gnl\|Hg17\|chr14 (23916696-23917102)
	1-404, gnl\|Mm7\|chr14 (50700922-50701296)