Ss1.1-Pig3-SRG8007D21.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATATTAGTTGGAGGAGGTTGGACGGAAGCCCATTGCCAGGGAAAGTCAAGTACAGCAAA TCCCAAGCTATCCTTGAAATCCCGAACTTTCAACAGGAAGATGAAGGCTTCTATGAATGC ATTGCAGGCAACCTTCGAGGAAGAAATCTTGCCAAGGGTCAACTGATTTTCTATGCCCCT CCAGAATGGGAACAAAAAATACAAAATACATACCTGTCTATCTATGACAGCTTGTTTTGG GAATGCAAAGCTAGTGGGAAGCCAAACCCTTGGTACACATGGTTAAAAAATGGTGAACGC CTCAATCCAGAGGAAAGAATTCAAATAGAAAATGGGACACTTATCATAACTATGCTGAAT GTATCAGATTCTGGTATCTACCAATGTGCAGCAGAAAACAAATATCAGATAGTTTATGCA AATGCAGAACTGAGAGTATTAGCCTCTGCTCCTGATTTCTCCAAAAATCCCGTTAAAAAA AATTCAGTTGTGCAAGTTGGTGGGGATATTGCAATCGAATGCAAACCAAATGCTTTCCCT AGAGCTACTATCTCCTGGAAAAGAGGAATGGAAAACCTGAGACAAAGCAAAAGAGTGTTT CTCATGGAGGATGGCAGTCTCAAGATATACAACGTTACCAGGTCAGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATATTAGTTGGAGGAGGTTGGACGGAAGCCCATTGCCAGGGAAAGTCAAGTACAGCAAA TCCCAAGCTATCCTTGAAATCCCGAACTTTCAACAGGAAGATGAAGGCTTCTATGAATGC ATTGCAGGCAACCTTCGAGGAAGAAATCTTGCCAAGGGTCAACTGATTTTCTATGCCCCT CCAGAATGGGAACAAAAAATACAAAATACATACCTGTCTATCTATGACAGCTTGTTTTGG GAATGCAAAGCTAGTGGGAAGCCAAACCCTTGGTACACATGGTTAAAAAATGGTGAACGC CTCAATCCAGAGGAAAGAATTCAAATAGAAAATGGGACACTTATCATAACTATGCTGAAT GTATCAGATTCTGGTATCTACCAATGTGCAGCAGAAAACAAATATCAGATAGTTTATGCA AATGCAGAACTGAGAGTATTAGCCTCTGCTCCTGATTTCTCCAAAAATCCCGTTAAAAAA AATTCAGTTGTGCAAGTTGGTGGGGATATTGCAATCGAATGCAAACCAAATGCTTTCCCT AGAGCTACTATCTCCTGGAAAAGAGGAATGGAAAACCTGAGACAAAGCAAAAGAGTGTTT CTCATGGAGGATGGCAGTCTCAAGATATACAACGTTACCAGGTCAGAT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-119, - strand, RNAz p=0.930265 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-119, - strand, RNAz p=0.930265 |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 1-175, gnl|bosTau2|chr22 (19966807-19966633) | |
| 1-175, gnl|canFam2|chr20 (18983833-18983608) | |
| 1-175, gnl|danRer3|chr6 (27367145-27366933) | |
| 1-175, gnl|dasNov1|scaffold_2269 (72287-72062) | |
| 1-175, gnl|echTel1|scaffold_248020 (1811-2036) | |
| 1-175, gnl|fr1|chrUn (224573856-224573662) | |
| 1-175, gnl|galGal2|chr12 (17533553-17533772) | |
| 1-175, gnl|hg17|chr3 (1338307-1338532) | |
| 1-175, gnl|Hg17|chr3 (1338344-1338518) | |
| 1-175, gnl|loxAfr1|scaffold_16092 (16335-16110) | |
| 1-175, gnl|mm7|chr6 (104863637-104863862) | |
| 1-175, gnl|Mm7|chr6 (104863674-104863848) | |
| 1-175, gnl|monDom2|scaffold_5 (25940240-25940465) | |
| 1-175, gnl|oryCun1|scaffold_215228 (53004-52786) | |
| 1-175, gnl|panTro1|chr2 (1367696-1367921) | |
| 1-175, gnl|rheMac2|chr2 (59679559-59679334) | |
| 1-175, gnl|rn3|chr4 (140597745-140597970) | |
| 1-175, gnl|tetNig1|chr11 (9711007-9710803) | |
| 311-442, gnl|bosTau2|chr22 (19958690-19958559) | |
| 311-442, gnl|canFam2|chr20 (18978342-18978194) | |
| 311-442, gnl|danRer3|chr6 (27357182-27357046) | |
| 311-442, gnl|dasNov1|scaffold_33521 (9750-9601) | |
| 311-442, gnl|echTel1|scaffold_248020 (10699-10851) | |
| 311-442, gnl|fr1|chrUn (224572328-224572177) | |
| 311-442, gnl|galGal2|chr12 (17538540-17538688) | |
| 311-442, gnl|hg17|chr3 (1344128-1344276) | |
| 311-442, gnl|Hg17|chr3 (1344139-1344270) | |
| 311-442, gnl|loxAfr1|scaffold_16092 (9605-9456) | |
| 311-442, gnl|mm7|chr6 (104870410-104870558) | |
| 311-442, gnl|Mm7|chr6 (104870421-104870552) | |
| 311-442, gnl|monDom2|scaffold_5 (25958022-25958170) | |
| 311-442, gnl|oryCun1|scaffold_215228 (48102-47957) | |
| 311-442, gnl|panTro1|chr2 (1373580-1373728) | |
| 311-442, gnl|rheMac2|chr2 (59673772-59673624) | |
| 311-442, gnl|rn3|chr4 (140604527-140604675) | |
| 311-442, gnl|tetNig1|chr11 (9709002-9708855) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-175, gnl|bosTau2|chr22 (19966807-19966633) | |
| 1-175, gnl|canFam2|chr20 (18983833-18983608) | |
| 1-175, gnl|danRer3|chr6 (27367145-27366933) | |
| 1-175, gnl|dasNov1|scaffold_2269 (72287-72062) | |
| 1-175, gnl|echTel1|scaffold_248020 (1811-2036) | |
| 1-175, gnl|fr1|chrUn (224573856-224573662) | |
| 1-175, gnl|galGal2|chr12 (17533553-17533772) | |
| 1-175, gnl|hg17|chr3 (1338307-1338532) | |
| 1-175, gnl|Hg17|chr3 (1338344-1338518) | |
| 1-175, gnl|loxAfr1|scaffold_16092 (16335-16110) | |
| 1-175, gnl|mm7|chr6 (104863637-104863862) | |
| 1-175, gnl|Mm7|chr6 (104863674-104863848) | |
| 1-175, gnl|monDom2|scaffold_5 (25940240-25940465) | |
| 1-175, gnl|oryCun1|scaffold_215228 (53004-52786) | |
| 1-175, gnl|panTro1|chr2 (1367696-1367921) | |
| 1-175, gnl|rheMac2|chr2 (59679559-59679334) | |
| 1-175, gnl|rn3|chr4 (140597745-140597970) | |
| 1-175, gnl|tetNig1|chr11 (9711007-9710803) | |
| 311-442, gnl|bosTau2|chr22 (19958690-19958559) | |
| 311-442, gnl|canFam2|chr20 (18978342-18978194) | |
| 311-442, gnl|danRer3|chr6 (27357182-27357046) | |
| 311-442, gnl|dasNov1|scaffold_33521 (9750-9601) | |
| 311-442, gnl|echTel1|scaffold_248020 (10699-10851) | |
| 311-442, gnl|fr1|chrUn (224572328-224572177) | |
| 311-442, gnl|galGal2|chr12 (17538540-17538688) | |
| 311-442, gnl|hg17|chr3 (1344128-1344276) | |
| 311-442, gnl|Hg17|chr3 (1344139-1344270) | |
| 311-442, gnl|loxAfr1|scaffold_16092 (9605-9456) | |
| 311-442, gnl|mm7|chr6 (104870410-104870558) | |
| 311-442, gnl|Mm7|chr6 (104870421-104870552) | |
| 311-442, gnl|monDom2|scaffold_5 (25958022-25958170) | |
| 311-442, gnl|oryCun1|scaffold_215228 (48102-47957) | |
| 311-442, gnl|panTro1|chr2 (1373580-1373728) | |
| 311-442, gnl|rheMac2|chr2 (59673772-59673624) | |
| 311-442, gnl|rn3|chr4 (140604527-140604675) | |
| 311-442, gnl|tetNig1|chr11 (9709002-9708855) |