Ss1.1-Pig3-SRG8007M08.3
|
TTAAGGAAAAATTATTTGAATCAGAAAAGCAAAGGAAACAATTGACAGAAGAACTCCAGA
ATGTAAAGCAAGAAGCCAAAGCTATGGTTGAAGAAACAAGAGCCCTGCGAAGTCGGATCC
ACCTTGCCGAAGCTGCACAAAGACAGGCGCATGGCATGGAAATGGATTATGAAGAAGTGA
TCCGTCTGTTAGAGGCTGAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACC
AAAATAAAGAAAGCGTTCAAGAATTAAGAAAGAGAATCACAGTACTTGACTGCCAATTAC
GAAAATCAGAAATGGCTCGAAAAACTTTTGAAGCATCCACTGAAAAACTTCTTCATTTTG
TAGAGACTATTCAAGAAGTATTTTCTGATAATTCTGCTCCTTTGTCAAATTTAAGTGAAA
GAAGAGCTATGTTAGCTTCCCAGACTTCGCTCACACCTCTGGGAAGGAATGGACGTAACA
TCCCAGCAACACTGGCACTTGAATCTAAGGAACTTGTTAAATCTGTCCGTGCTGTGCTTG
ATATGGATTGTCTACCTTACGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACT
TCATCAATCATGTGACGCAGACTACATCCTGGATACATCCCGTGATGAGTGCGCTGAGCC
TGTCCTGCTCAGAGGAGAATGAAGAGGATTGCTCCAGAGAACTTCCTGACCAGAAGAACT
GATGGCTTTCTGTGGCAAGCTGAGCGCCATGGGGCTCTGGCATTTCCATCTACACGGATG
ACCCCGAAAACGCGGCATGCAAAATAGGAGTAAAACACACACTACTTAATGAAATTGTGA
AATGGGGACTCGATTTAGGCTATTTTTGTATAACTTTTTGATATAACTGTATATAGTCAC
AAAATTGATGGCCACTAGAGTAGTTCTTTAAGAATAATCTTGCCATGTTTTTTGAAAGCA
TCTATAATGAGATTTTATAATATGTGTATTTTTCATGTGTAATTAGATCTTTGTAATATT
ATAGTTTTTGAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTAAGGAAAAATTATTTGAATCAGAAAAGCAAAGGAAACAATTGACAGAAGAACTCCAGA
ATGTAAAGCAAGAAGCCAAAGCTATGGTTGAAGAAACAAGAGCCCTGCGAAGTCGGATCC
ACCTTGCCGAAGCTGCACAAAGACAGGCGCATGGCATGGAAATGGATTATGAAGAAGTGA
TCCGTCTGTTAGAGGCTGAGATTACAGAGCTAAAGGCTCAGCTTGCTGATTATTCTGACC
AAAATAAAGAAAGCGTTCAAGAATTAAGAAAGAGAATCACAGTACTTGACTGCCAATTAC
GAAAATCAGAAATGGCTCGAAAAACTTTTGAAGCATCCACTGAAAAACTTCTTCATTTTG
TAGAGACTATTCAAGAAGTATTTTCTGATAATTCTGCTCCTTTGTCAAATTTAAGTGAAA
GAAGAGCTATGTTAGCTTCCCAGACTTCGCTCACACCTCTGGGAAGGAATGGACGTAACA
TCCCAGCAACACTGGCACTTGAATCTAAGGAACTTGTTAAATCTGTCCGTGCTGTGCTTG
ATATGGATTGTCTACCTTACGGGTGGGAGGAAGCTTACACAGCAGATGGAATCAAGTACT
TCATCAATCATGTGACGCAGACTACATCCTGGATACATCCCGTGATGAGTGCGCTGAGCC
TGTCCTGCTCAGAGGAGAATGAAGAGGATTGCTCCAGAGAACTTCCTGACCAGAAGAACT
GATGGCTTTCTGTGGCAAGCTGAGCGCCATGGGGCTCTGGCATTTCCATCTACACGGATG
ACCCCGAAAACGCGGCATGCAAAATAGGAGTAAAACACACACTACTTAATGAAATTGTGA
AATGGGGACTCGATTTAGGCTATTTTTGTATAACTTTTTGATATAACTGTATATAGTCAC
AAAATTGATGGCCACTAGAGTAGTTCTTTAAGAATAATCTTGCCATGTTTTTTGAAAGCA
TCTATAATGAGATTTTATAATATGTGTATTTTTCATGTGTAATTAGATCTTTGTAATATT
ATAGTTTTTGAT
|
|
gi|56206628|emb|CAI23907.1| |
Protein identifier
|
gi|56206628|emb|CAI23907.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-416, gnl|bosTau2|chr27 (23151398-23150986) |
|
1-416, gnl|Hg17|chr17 (50505243-50513445) |
| |
|
451-999, gnl|bosTau2|chr27 (23150986-23150438) |
| |
|
609-771, gnl|bosTau2|chr19 (585976-585814) |
|
609-771, gnl|canFam2|chr9 (33557807-33558069) |
|
609-771, gnl|dasNov1|scaffold_583 (63218-63478) |
|
609-771, gnl|echTel1|scaffold_321913 (9727-10003) |
|
609-771, gnl|hg17|chr17 (50592045-50592302) |
|
609-771, gnl|Hg17|chr17 (50592158-50592301) |
|
609-771, gnl|loxAfr1|scaffold_39693 (6719-6434) |
|
609-771, gnl|mm7|chr11 (90589872-90589610) |
|
609-771, gnl|Mm7|chr11 (90589752-90589591) |
|
609-771, gnl|monDom2|scaffold_56 (9141468-9141223) |
|
609-771, gnl|oryCun1|scaffold_199532 (73275-73088) |
|
609-771, gnl|panTro1|chr19_random (36315422-36315679) |
|
609-771, gnl|rheMac2|chr16 (39420346-39420603) |
|
609-771, gnl|rn3|chr10 (78902935-78902690) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-416, gnl|bosTau2|chr27 (23151398-23150986) |
|
1-416, gnl|Hg17|chr17 (50505243-50513445) |
| |
|
451-999, gnl|bosTau2|chr27 (23150986-23150438) |
| |
|
609-771, gnl|bosTau2|chr19 (585976-585814) |
|
609-771, gnl|canFam2|chr9 (33557807-33558069) |
|
609-771, gnl|dasNov1|scaffold_583 (63218-63478) |
|
609-771, gnl|echTel1|scaffold_321913 (9727-10003) |
|
609-771, gnl|hg17|chr17 (50592045-50592302) |
|
609-771, gnl|Hg17|chr17 (50592158-50592301) |
|
609-771, gnl|loxAfr1|scaffold_39693 (6719-6434) |
|
609-771, gnl|mm7|chr11 (90589872-90589610) |
|
609-771, gnl|Mm7|chr11 (90589752-90589591) |
|
609-771, gnl|monDom2|scaffold_56 (9141468-9141223) |
|
609-771, gnl|oryCun1|scaffold_199532 (73275-73088) |
|
609-771, gnl|panTro1|chr19_random (36315422-36315679) |
|
609-771, gnl|rheMac2|chr16 (39420346-39420603) |
|
609-771, gnl|rn3|chr10 (78902935-78902690) |
