Ss1.1-Pig3-SRG8008M16.3
               |  | GATGTAACAGTTAACTTTGAAAATTCAAACGGGCACATGAATACCCATCGGAGAGGAGTC
TACCCGAGAGGAAAATATAGTAAAAACTGAAGAAGGGAATGGCTCTGTAGCTGAAAAAGC
ACCACCTCTGGAGGAAAAGGCAGAAGATAAGAAAGAGAACACTGAAAACCACTTTGAAAC
ACCGGCAGCTCCTGTTCCACCTCCTCCAGCTCTTCATAAGCATAAACCCAAACTTAAACC
CAAAAAAACACCTGTGCCTCCAAAAGGGGCCGCTGCCGGGGCCAGCCCCAAGGGTGATGA
AGTGCCTCCTATTAAAAAAATACCAAGACTCCTGGTAAGCAGGTCCCTGTCCCTCTACCC
AAGCCAACAAGCCGAAATGCTACCCGAGAGGCTGAAAAGAATGAAGAAGAAGAGCAAGAA
GCAAAAATGGAACTTAAACGCAGACTCAGCCGAAAGCTCAGCTTGAGACCCACAGTGGCA
GAGCTGCAAGCTCGAAGGATCCTGCGGTTTAATGAGTATGTAGAAGTCACCGATTCGCCA
GACTATGATCGCCGAGCAGACAAGCCTTGGGCCAGGTTAACGCCTGCAGACAAGGCAAGA
ACCTCAGTGGCTTGTGCCATGATTTTTTTTATTTAGGACTTTATTGCTTTTCTAAAAGCT
CCAATACCTACTATGCCCCTAGTTAGTCATCTTGGGGGACTAGGTATTACCAAATATCCC
AATAATTTTGTGCCTTTGATTATTTAAGCCACTTAAGTGGCATATTTAATAATACCAGTG
TAGTTCTTTCAACTAAGTCCCAGACAAAACTGATTCTTGGTTACCATGTAATCTGCCTGC
ATTCAAACCTGGACTGGAAGTGGGGGGTGCTTTCCCACACCCATTATTTATCTTTACTCT
TAGAAAATATAACTTGTATGCAAGTTATCCTTTTAAAGGGATATGTTAACAGTGGAAAAG
ATACTGCTCTATATCAAGCCTGGCACAGTTTTTCTATAAACAGCCAGAGGGTGAATATTT
TAGGCTTTGTGAATCATCCAGGCCGTGTTGCAATGGCTCAGCTCTGCCTTTGTAGTATGA
GAGCAGTTATAAACAATATGTAAG | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | GATGTAACAGTTAACTTTGAAAATTCAAACGGGCACATGAATACCCATCGGAGAGGAGTC
TACCCGAGAGGAAAATATAGTAAAAACTGAAGAAGGGAATGGCTCTGTAGCTGAAAAAGC
ACCACCTCTGGAGGAAAAGGCAGAAGATAAGAAAGAGAACACTGAAAACCACTTTGAAAC
ACCGGCAGCTCCTGTTCCACCTCCTCCAGCTCTTCATAAGCATAAACCCAAACTTAAACC
CAAAAAAACACCTGTGCCTCCAAAAGGGGCCGCTGCCGGGGCCAGCCCCAAGGGTGATGA
AGTGCCTCCTATTAAAAAAATACCAAGACTCCTGGTAAGCAGGTCCCTGTCCCTCTACCC
AAGCCAACAAGCCGAAATGCTACCCGAGAGGCTGAAAAGAATGAAGAAGAAGAGCAAGAA
GCAAAAATGGAACTTAAACGCAGACTCAGCCGAAAGCTCAGCTTGAGACCCACAGTGGCA
GAGCTGCAAGCTCGAAGGATCCTGCGGTTTAATGAGTATGTAGAAGTCACCGATTCGCCA
GACTATGATCGCCGAGCAGACAAGCCTTGGGCCAGGTTAACGCCTGCAGACAAGGCAAGA
ACCTCAGTGGCTTGTGCCATGATTTTTTTTATTTAGGACTTTATTGCTTTTCTAAAAGCT
CCAATACCTACTATGCCCCTAGTTAGTCATCTTGGGGGACTAGGTATTACCAAATATCCC
AATAATTTTGTGCCTTTGATTATTTAAGCCACTTAAGTGGCATATTTAATAATACCAGTG
TAGTTCTTTCAACTAAGTCCCAGACAAAACTGATTCTTGGTTACCATGTAATCTGCCTGC
ATTCAAACCTGGACTGGAAGTGGGGGGTGCTTTCCCACACCCATTATTTATCTTTACTCT
TAGAAAATATAACTTGTATGCAAGTTATCCTTTTAAAGGGATATGTTAACAGTGGAAAAG
ATACTGCTCTATATCAAGCCTGGCACAGTTTTTCTATAAACAGCCAGAGGGTGAATATTT
TAGGCTTTGTGAATCATCCAGGCCGTGTTGCAATGGCTCAGCTCTGCCTTTGTAGTATGA
GAGCAGTTATAAACAATATGTAAG | 
               |  | 1-170, gnl|bosTau2|chr9 (47916598-47916429) | 
               |  | 1-170, gnl|canFam2|chr1 (38331274-38331664) | 
               |  | 1-170, gnl|dasNov1|scaffold_21286 (4972-5320) | 
               |  | 1-170, gnl|echTel1|scaffold_315105 (56295-56690) | 
               |  | 1-170, gnl|galGal2|chr3 (51287895-51287449) | 
               |  | 1-170, gnl|hg17|chr6 (144116468-144116862) | 
               |  | 1-170, gnl|Hg17|chr6 (144116589-144116758) | 
               |  | 1-170, gnl|loxAfr1|scaffold_15507 (18475-18845) | 
               |  | 1-170, gnl|mm7|chr10 (12962398-12962023) | 
               |  | 1-170, gnl|Mm7|chr10 (12962276-12962107) | 
               |  | 1-170, gnl|monDom2|scaffold_0 (63771621-63771216) | 
               |  | 1-170, gnl|oryCun1|scaffold_204255 (256081-256462) | 
               |  | 1-170, gnl|panTro1|chr5 (147034085-147034479) | 
               |  | 1-170, gnl|rheMac2|chr4 (119928257-119927865) | 
               |  | 1-170, gnl|rn3|chr1 (8034536-8034160) | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
               |  | 1-170, gnl|bosTau2|chr9 (47916598-47916429) | 
               |  | 1-170, gnl|canFam2|chr1 (38331274-38331664) | 
               |  | 1-170, gnl|dasNov1|scaffold_21286 (4972-5320) | 
               |  | 1-170, gnl|echTel1|scaffold_315105 (56295-56690) | 
               |  | 1-170, gnl|galGal2|chr3 (51287895-51287449) | 
               |  | 1-170, gnl|hg17|chr6 (144116468-144116862) | 
               |  | 1-170, gnl|Hg17|chr6 (144116589-144116758) | 
               |  | 1-170, gnl|loxAfr1|scaffold_15507 (18475-18845) | 
               |  | 1-170, gnl|mm7|chr10 (12962398-12962023) | 
               |  | 1-170, gnl|Mm7|chr10 (12962276-12962107) | 
               |  | 1-170, gnl|monDom2|scaffold_0 (63771621-63771216) | 
               |  | 1-170, gnl|oryCun1|scaffold_204255 (256081-256462) | 
               |  | 1-170, gnl|panTro1|chr5 (147034085-147034479) | 
               |  | 1-170, gnl|rheMac2|chr4 (119928257-119927865) | 
               |  | 1-170, gnl|rn3|chr1 (8034536-8034160) |