Ss1.1-Pig3-SRG8009C21.5
|
AAAGAAGAGCAGGATGGAAGTGGTTAGGTGTCCGCAGCATGGCACCTTATGCTTTCTGAA
GACCGGCGTCCGCGATGGCCCGAATAAAGGAAAGAGCTTCTACGTGTGCCCGGCGGACAC
ATGCAACTTTCTGAGGGCCACTGACATTCCTGTTTCTCACTGTTTATTGCATGAAGGCAT
GGTGGTAGAGCTTCAAGGCCTGTTTCTACCACAGGGCAAGAAAGAATACAGGCTGTTGTT
CCGATGTACTAGAAGTAAGGCAGAGGGGAAGCGGTGGTGTGGAAATATCCCATGGCAGGA
TCCTAATTCCAAAGGATATTCTGTAACCAGTAAGTCTCAGCATGCATCTGAGCCCCCTCA
TTATCCTTTCAGCCAGCAGAGAAACCCATTCAAGGTACTTGACAAGAATCAAGAACCTTC
CCTCTGGAAACAGTTCATCAAGGGTGAAGATGAAGAAAAGACAGCCCATAAGAAGCAAAA
GGAAAAGGGACATCCACTCCTGGATCAAGACAATGTGCAGAAGCCTGAATCTAAGTGCTG
GATGGAGAAGGATCTCTCATCTGGCCTGGTGGTAAAGGAAAAACCATCTGCAGTTCAAGA
GAAGCAGCGAGGGGAGAAGACAGAGTTTCAGTGTGACACAAAGGAGCTTGAAGGGATGCA
CCAAAGAAAGGTGTTTGAGATGAAATCCAGACAGGTCCACAAGGATGAGCTGAGAGAACC
ACCCGTGTCTCAGGAGACAGCAAATGGTGACAGTTATATCCGGAAGGAATCAGAACCTCC
GAGGAAAGAGGAAACTAAGCCTTTGCCTCGAACTGTTCCCAGTCAACACCCAATAAACCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAGAAGAGCAGGATGGAAGTGGTTAGGTGTCCGCAGCATGGCACCTTATGCTTTCTGAA
GACCGGCGTCCGCGATGGCCCGAATAAAGGAAAGAGCTTCTACGTGTGCCCGGCGGACAC
ATGCAACTTTCTGAGGGCCACTGACATTCCTGTTTCTCACTGTTTATTGCATGAAGGCAT
GGTGGTAGAGCTTCAAGGCCTGTTTCTACCACAGGGCAAGAAAGAATACAGGCTGTTGTT
CCGATGTACTAGAAGTAAGGCAGAGGGGAAGCGGTGGTGTGGAAATATCCCATGGCAGGA
TCCTAATTCCAAAGGATATTCTGTAACCAGTAAGTCTCAGCATGCATCTGAGCCCCCTCA
TTATCCTTTCAGCCAGCAGAGAAACCCATTCAAGGTACTTGACAAGAATCAAGAACCTTC
CCTCTGGAAACAGTTCATCAAGGGTGAAGATGAAGAAAAGACAGCCCATAAGAAGCAAAA
GGAAAAGGGACATCCACTCCTGGATCAAGACAATGTGCAGAAGCCTGAATCTAAGTGCTG
GATGGAGAAGGATCTCTCATCTGGCCTGGTGGTAAAGGAAAAACCATCTGCAGTTCAAGA
GAAGCAGCGAGGGGAGAAGACAGAGTTTCAGTGTGACACAAAGGAGCTTGAAGGGATGCA
CCAAAGAAAGGTGTTTGAGATGAAATCCAGACAGGTCCACAAGGATGAGCTGAGAGAACC
ACCCGTGTCTCAGGAGACAGCAAATGGTGACAGTTATATCCGGAAGGAATCAGAACCTCC
GAGGAAAGAGGAAACTAAGCCTTTGCCTCGAACTGTTCCCAGTCAACACCCAATAAACCA |
|
gi|47221990|emb|CAG08245.1| |
Protein identifier
|
gi|47221990|emb|CAG08245.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
41-144, gnl|bosTau2|chr3 (22181012-22181115) |
|
41-144, gnl|Hg17|chr1 (117315118-117315221) |
|
41-144, gnl|Mm7|chr3 (100764353-100764250) |
| |
|
297-840, gnl|bosTau2|chr3 (22198638-22199184) |
|
297-840, gnl|canFam2|chr17 (57531759-57532566) |
|
297-840, gnl|dasNov1|scaffold_1997 (50730-49929) |
|
297-840, gnl|echTel1|scaffold_313524 (37339-36477) |
|
297-840, gnl|galGal2|chr1 (78223909-78224707) |
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297-840, gnl|hg17|chr1 (117329466-117330298) |
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297-840, gnl|Hg17|chr1 (117329532-117330069) |
|
297-840, gnl|loxAfr1|scaffold_53121 (3574-2726) |
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297-840, gnl|mm7|chr3 (100758351-100757588) |
|
297-840, gnl|Mm7|chr3 (100758286-100757773) |
|
297-840, gnl|monDom2|scaffold_82 (3233599-3234384) |
|
297-840, gnl|oryCun1|scaffold_178159 (39011-39809) |
|
297-840, gnl|panTro1|chr1 (117171595-117172427) |
|
297-840, gnl|rheMac2|chr1 (120046483-120047318) |
|
297-840, gnl|rn3|chr2 (195975576-195974790) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
41-144, gnl|bosTau2|chr3 (22181012-22181115) |
|
41-144, gnl|Hg17|chr1 (117315118-117315221) |
|
41-144, gnl|Mm7|chr3 (100764353-100764250) |
| |
|
297-840, gnl|bosTau2|chr3 (22198638-22199184) |
|
297-840, gnl|canFam2|chr17 (57531759-57532566) |
|
297-840, gnl|dasNov1|scaffold_1997 (50730-49929) |
|
297-840, gnl|echTel1|scaffold_313524 (37339-36477) |
|
297-840, gnl|galGal2|chr1 (78223909-78224707) |
|
297-840, gnl|hg17|chr1 (117329466-117330298) |
|
297-840, gnl|Hg17|chr1 (117329532-117330069) |
|
297-840, gnl|loxAfr1|scaffold_53121 (3574-2726) |
|
297-840, gnl|mm7|chr3 (100758351-100757588) |
|
297-840, gnl|Mm7|chr3 (100758286-100757773) |
|
297-840, gnl|monDom2|scaffold_82 (3233599-3234384) |
|
297-840, gnl|oryCun1|scaffold_178159 (39011-39809) |
|
297-840, gnl|panTro1|chr1 (117171595-117172427) |
|
297-840, gnl|rheMac2|chr1 (120046483-120047318) |
|
297-840, gnl|rn3|chr2 (195975576-195974790) |
