Ss1.1-Pig3-SRG8009H15.5
|
TTTTGGACAGTA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------GGAACTTCCATGTGCCAGGGTACA
GCCCTAAAAAGACAAAAGACAAAAGAAACAAAAGCAAACCAGAAAGATACATCTACCCCT
ACATCCATAGCAGCACTATTCACAGTAGCCAAGACATGGAAGCAACCTAAATGTTCATTG
ACATAGGAGTGGATGGAGAAGATACAGTACCTGTACACAGTGGAATACTACTCAGCCATA
AAAACAAATGAAATGATGCCATTTGCCGCAACATGGATGCAACAAAGTGAAGTAACCCAG
AAAGAGAAAGACAAATACCATATAATACCATTTACATGTGGAATCTAAAATATGACACAA
ATGAAGCTATCTACAAAACAGAGACAGACCCACAGACAAGCAGAACAGACTTGTGGTTGC
CAAGAGGATGGGGTTGGGGGAGGGATGGAGTGGGAGGCTGGGGTGAGCAGGTGTGAGCTC
TTATACCCAGAGGGGCTAAACATCAAGGTCTTACGTCTAACACAGAGAACTCTATGCAGT
GTCCTACGATGAGCCATAATGGAGAAGAATACTGAAGGACGTATATGTATGTATGACAAT
GACTTTGCTGTACAGCAACAGTTAATACAACTATACTTCAGTAAAATAAATTTTTTTAAA
AAAAGAAACTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTTGGACAGTA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------GGAACTTCCATGTGCCAGGGTACA
GCCCTAAAAAGACAAAAGACAAAAGAAACAAAAGCAAACCAGAAAGATACATCTACCCCT
ACATCCATAGCAGCACTATTCACAGTAGCCAAGACATGGAAGCAACCTAAATGTTCATTG
ACATAGGAGTGGATGGAGAAGATACAGTACCTGTACACAGTGGAATACTACTCAGCCATA
AAAACAAATGAAATGATGCCATTTGCCGCAACATGGATGCAACAAAGTGAAGTAACCCAG
AAAGAGAAAGACAAATACCATATAATACCATTTACATGTGGAATCTAAAATATGACACAA
ATGAAGCTATCTACAAAACAGAGACAGACCCACAGACAAGCAGAACAGACTTGTGGTTGC
CAAGAGGATGGGGTTGGGGGAGGGATGGAGTGGGAGGCTGGGGTGAGCAGGTGTGAGCTC
TTATACCCAGAGGGGCTAAACATCAAGGTCTTACGTCTAACACAGAGAACTCTATGCAGT
GTCCTACGATGAGCCATAATGGAGAAGAATACTGAAGGACGTATATGTATGTATGACAAT
GACTTTGCTGTACAGCAACAGTTAATACAACTATACTTCAGTAAAATAAATTTTTTTAAA
AAAAGAAACTGG
|
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map