Ss1.1-Pig3-SRG8010G19.5
|
TTTATGACTACTACTGCCGTAGAACCATGAGGAAAATTAAGCGCAGAACAGATACCATGA
GACTCCTGGAAAGGCCACCAGAATTCACCCTGCCTCTCTATAACAAGACAGCTTATGTGG
GTGAAAATGTCCGGTTTGGAGTAACTATAACCGTCCACCCAGAGCCTCGTGTAACATGGT
ATAAATCAGGTCAGAAAATCAAACCAGGTGATGATGATAGGAAGTACACATTCGAGTCAG
ACAAGGGTCTTTACCAATTAACAATCCACAGTGTAACTATGGAGGATGATGCCGAATACA
CTGTGGTGGCAAGGAACAAATACGGTGAGGACAGCTGCAAAGCTAAGCTGACTGTCACTC
CACACCCACCTCCAACAGATACAACCTTGAGACCGATGTTCAAACGGCTACTGGCAAATG
CAGAATGCCAGGAAGGCCAAAGTGTCTGCTTCGAGATCAGAGTGTCTGGCATCCCCCCGC
CAACATTAAAATGGGAGAAAGATGGTCAGCCTCTGTCCCTTGGGCCTAACATTGAAATCA
TCCATGAAGGCTTGGATTATTATGCCTTGCACATCAGGGATACTCTGCCTGAAGACACAG
GTTATTACAGGGTCACAGCTACAAACACAGCTGGATCCACCAGCTGCCAGGCCCACCTAC
AAGTGGAACGCCTGAGGTATGTCAAACAGGAATTCAAGACTAAGGAGGAGCGAGAACGAC
ACGTACAGAGGCAAATTGACAAGACACTCAGAATGGCTGAAATTCTTTCTGGAACTGAGA
CTGTGTCACTGACACACGTTGCCCAGGAGGCACTGAGGGAAGCTGCCATCCTTTACAAAC
CCGCTATAAGCACCAAGACCGTGAAAGGGGAATACCGACTTGAGACAGAAGAGAAGAAGG
AGGAGAGAAAATTCCGCATGCCCTACGAAGTACCAGAGCCACGCAAGTTCAAACAGACCA
CCATAGAAGAAGACCAACACATTAAGCAGTTCGTGCCTATGTCTGACATGAAATGGTACA
AAAAGATACGGGATCAATTTGAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTATGACTACTACTGCCGTAGAACCATGAGGAAAATTAAGCGCAGAACAGATACCATGA
GACTCCTGGAAAGGCCACCAGAATTCACCCTGCCTCTCTATAACAAGACAGCTTATGTGG
GTGAAAATGTCCGGTTTGGAGTAACTATAACCGTCCACCCAGAGCCTCGTGTAACATGGT
ATAAATCAGGTCAGAAAATCAAACCAGGTGATGATGATAGGAAGTACACATTCGAGTCAG
ACAAGGGTCTTTACCAATTAACAATCCACAGTGTAACTATGGAGGATGATGCCGAATACA
CTGTGGTGGCAAGGAACAAATACGGTGAGGACAGCTGCAAAGCTAAGCTGACTGTCACTC
CACACCCACCTCCAACAGATACAACCTTGAGACCGATGTTCAAACGGCTACTGGCAAATG
CAGAATGCCAGGAAGGCCAAAGTGTCTGCTTCGAGATCAGAGTGTCTGGCATCCCCCCGC
CAACATTAAAATGGGAGAAAGATGGTCAGCCTCTGTCCCTTGGGCCTAACATTGAAATCA
TCCATGAAGGCTTGGATTATTATGCCTTGCACATCAGGGATACTCTGCCTGAAGACACAG
GTTATTACAGGGTCACAGCTACAAACACAGCTGGATCCACCAGCTGCCAGGCCCACCTAC
AAGTGGAACGCCTGAGGTATGTCAAACAGGAATTCAAGACTAAGGAGGAGCGAGAACGAC
ACGTACAGAGGCAAATTGACAAGACACTCAGAATGGCTGAAATTCTTTCTGGAACTGAGA
CTGTGTCACTGACACACGTTGCCCAGGAGGCACTGAGGGAAGCTGCCATCCTTTACAAAC
CCGCTATAAGCACCAAGACCGTGAAAGGGGAATACCGACTTGAGACAGAAGAGAAGAAGG
AGGAGAGAAAATTCCGCATGCCCTACGAAGTACCAGAGCCACGCAAGTTCAAACAGACCA
CCATAGAAGAAGACCAACACATTAAGCAGTTCGTGCCTATGTCTGACATGAAATGGTACA
AAAAGATACGGGATCAATTTGAAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map