Non-Coding RNA Search

Ss1.1-Pig3-SRG8011A07.5

Sequence:


               
               GCGCGCCCAGTTCCGGCTCAGCCGCCACCATGTCTCTGACCAGAGCTGAGAGGACCATCA
TCGTGTCCATGTGGAGCAAGATCTCCACACAGGCGGACCTCATTGGCACCGAGACCCTGG
AGAGGCTCTTCTCCTGCTACCCGCAGGCCAAGACCTACTTCCCGCACTTCGACCTGCACA
CGGGCTCCGCGCAGCTGCGCGCGCACGGCTCCAGGGTGGTGGCCGCCGTGGGCGACGCGG
TCAAGAGCATTGACAACGTGACGAGCGCGCTGTCCAAGCTGAGCGAGCTGCACGCCTACG
TGCTGCGCGTGGACCCGGTCAACTTCAAGTTCCTGTCTCACTGCCTGCTGGTCACGTTGG
CCTCGCACTTCCCCGCCGACTTCACGGCCGACGTGCACGCCGCCTGGGACAAGTTCCTGT
CGATTGTATCCGGCGTCCTGACGGAGAAGTACCGCTGAGGCCGCCGCAGTACCCCCAGGA
CGGAATGGGCCCCCAGATGCTCTAAGGAGTCTCACACCCCACCCCACGCCTTCCCCGAGA
CGGGCCAATAAACGAATTAACGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGCGCCCAGTTCCGGCTCAGCCGCCACCATGTCTCTGACCAGAGCTGAGAGGACCATCA
TCGTGTCCATGTGGAGCAAGATCTCCACACAGGCGGACCTCATTGGCACCGAGACCCTGG
AGAGGCTCTTCTCCTGCTACCCGCAGGCCAAGACCTACTTCCCGCACTTCGACCTGCACA
CGGGCTCCGCGCAGCTGCGCGCGCACGGCTCCAGGGTGGTGGCCGCCGTGGGCGACGCGG
TCAAGAGCATTGACAACGTGACGAGCGCGCTGTCCAAGCTGAGCGAGCTGCACGCCTACG
TGCTGCGCGTGGACCCGGTCAACTTCAAGTTCCTGTCTCACTGCCTGCTGGTCACGTTGG
CCTCGCACTTCCCCGCCGACTTCACGGCCGACGTGCACGCCGCCTGGGACAAGTTCCTGT
CGATTGTATCCGGCGTCCTGACGGAGAAGTACCGCTGAGGCCGCCGCAGTACCCCCAGGA
CGGAATGGGCCCCCAGATGCTCTAAGGAGTCTCACACCCCACCCCACGCCTTCCCCGAGA
CGGGCCAATAAACGAATTAACGTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61864997|ref|XP_580707.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61864997|ref|XP_580707.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-125, gnl|bosTau2|chr25 (2612333-2612457)
               

               
               1-125, gnl|Hg17|chr16 (142871-143004)
               

               
               1-125, gnl|Mm7|chr11 (32228626-32228769)
               


               
               328-564, gnl|bosTau2|chr25 (2613243-2613479)
               

               
               328-564, gnl|Hg17|chr16 (144269-144510)
               

               
               328-564, gnl|Mm7|chr11 (32229888-32230095)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-125, gnl|bosTau2|chr25 (2612333-2612457)
               

               
               1-125, gnl|Hg17|chr16 (142871-143004)
               

               
               1-125, gnl|Mm7|chr11 (32228626-32228769)
               


               
               328-564, gnl|bosTau2|chr25 (2613243-2613479)
               

               
               328-564, gnl|Hg17|chr16 (144269-144510)
               

               
               328-564, gnl|Mm7|chr11 (32229888-32230095)

	1-125, gnl\|bosTau2\|chr25 (2612333-2612457)
	1-125, gnl\|Hg17\|chr16 (142871-143004)
	1-125, gnl\|Mm7\|chr11 (32228626-32228769)

	328-564, gnl\|bosTau2\|chr25 (2613243-2613479)
	328-564, gnl\|Hg17\|chr16 (144269-144510)
	328-564, gnl\|Mm7\|chr11 (32229888-32230095)