Non-Coding RNA Search

Ss1.1-Pig3-SRG8011N24.3

Sequence:


               
               ATGGGATTGAATTCGATGCGCCCAGCCATGTTCCCACAGCCATCCCGGGAGCAGCCACAT
GGAAAGGACATGCGATCCACCTGAGGGGACAAGGAGGTTGCAGCCAGATGAGATGGGAGA
TGTTAGCCAGCGAATACAGGGAGTTGCAGTTTGAAGTCTTTATAACTCACAAAACATGTA
GCTAACAGCTCTAGGTAGACGGGAGTGAGCAGACCACTTGCATTTCAATTCCAGCACAGC
CGTTAAAATTAATTAGCAGTGTGACCTCAAGAAAGTCATTTCTCTCTCTAAGGCTCTGTT
TCCTCTTCTTAACAAAAAAGGAGACAAAGACCATATCAAAGGGCCCTTCCAGTTAAAAGT
CCAGAGATGCCTCTGAATGCCGACAATTCTCAGAGAAAAGAAACTTACGTGCCTCAGACA
CTTTTCCAGAACTCAACTACTTTATTAAGAAGAAACAAAGGCCAGGGCCCAAGCCTCCTG
CATTCTTTGACGACAGGCAGGGCGAGGGTGGTAAAGATCTAGCTGGTCCAGAGCGAAGCA
CTATGAGGAAACTACGCAAAAGTGCCTTCGTTTGCCAAGGAGCTGTACCGAAGTTTCCAA
CAAAAGTAATGGCCAGCTTTTCCCTAACTGCTTCATTTCTCCATGATGGTTGGCCAACCT
GGTTCAGAAACAGTTATCAAGACAACTTACAGACCAAGGATATCTGGAAAGGATAGGCTG
TCCACCTCCTTAGCTGCTTTGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATGGGATTGAATTCGATGCGCCCAGCCATGTTCCCACAGCCATCCCGGGAGCAGCCACAT
GGAAAGGACATGCGATCCACCTGAGGGGACAAGGAGGTTGCAGCCAGATGAGATGGGAGA
TGTTAGCCAGCGAATACAGGGAGTTGCAGTTTGAAGTCTTTATAACTCACAAAACATGTA
GCTAACAGCTCTAGGTAGACGGGAGTGAGCAGACCACTTGCATTTCAATTCCAGCACAGC
CGTTAAAATTAATTAGCAGTGTGACCTCAAGAAAGTCATTTCTCTCTCTAAGGCTCTGTT
TCCTCTTCTTAACAAAAAAGGAGACAAAGACCATATCAAAGGGCCCTTCCAGTTAAAAGT
CCAGAGATGCCTCTGAATGCCGACAATTCTCAGAGAAAAGAAACTTACGTGCCTCAGACA
CTTTTCCAGAACTCAACTACTTTATTAAGAAGAAACAAAGGCCAGGGCCCAAGCCTCCTG
CATTCTTTGACGACAGGCAGGGCGAGGGTGGTAAAGATCTAGCTGGTCCAGAGCGAAGCA
CTATGAGGAAACTACGCAAAAGTGCCTTCGTTTGCCAAGGAGCTGTACCGAAGTTTCCAA
CAAAAGTAATGGCCAGCTTTTCCCTAACTGCTTCATTTCTCCATGATGGTTGGCCAACCT
GGTTCAGAAACAGTTATCAAGACAACTTACAGACCAAGGATATCTGGAAAGGATAGGCTG
TCCACCTCCTTAGCTGCTTTGGAA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-160, gnl|bosTau2|chr5 (18792157-18792316)
               

               
               1-160, gnl|Hg17|chr12 (49744640-49744821)
               

               
               1-160, gnl|Mm7|chr15 (100467866-100468040)
               


               
               203-730, gnl|bosTau2|chr5 (18792497-18793008)
               

               
               203-730, gnl|Hg17|chr12 (49744890-49745403)
               

               
               203-730, gnl|Mm7|chr15 (100468098-100468786)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-160, gnl|bosTau2|chr5 (18792157-18792316)
               

               
               1-160, gnl|Hg17|chr12 (49744640-49744821)
               

               
               1-160, gnl|Mm7|chr15 (100467866-100468040)
               


               
               203-730, gnl|bosTau2|chr5 (18792497-18793008)
               

               
               203-730, gnl|Hg17|chr12 (49744890-49745403)
               

               
               203-730, gnl|Mm7|chr15 (100468098-100468786)

	1-160, gnl\|bosTau2\|chr5 (18792157-18792316)
	1-160, gnl\|Hg17\|chr12 (49744640-49744821)
	1-160, gnl\|Mm7\|chr15 (100467866-100468040)

	203-730, gnl\|bosTau2\|chr5 (18792497-18793008)
	203-730, gnl\|Hg17\|chr12 (49744890-49745403)
	203-730, gnl\|Mm7\|chr15 (100468098-100468786)