Ss1.1-Pig3-SRG8011P07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTATGCGAAGACACCAAAGATGGCGGCTGTGGCCTCGGCTCGCTGGCTGGGGGTCCGCAG CGGGCTTTGCTTACCTCTGACGGGTCGGCGGGTGGGTCCATGTGGACGGACCCCCAGAAG CAGATTTTATTCTGGAAGTGCAGCTCACCCAGAGGTTGAAGGTGCTAATGTAACAGGGAT TGAAGAAGTGGTCATTCCAAAAAAGAAAACTTGGGACAAAGTGGCCATTCTTCAGGCACT TGCATCCACAGTACACAGGGATAGCACAGCTGCCCCTTATGTGTTTCAAGATGATCCTTA TCTCATACCAACATCCTCTGTGGAATCTCATTCATTTTTGTTGGCAAAGAAGTCTGGGGA GAATGCAGCAAAATTTATTATTAATTCATACCCAAAATATTTTCAGAAGGACATAGCTGA ACCTCATATACCGTGTTTAATGCCCGAGTACTTTGAACCTCAGATTGAAGATGTAAGTGA GGCTGCCCTGCAGGAACGAATCAAACTCAGAAAGGTCAAAGCTTCTGTGGACATGTTTGA TCAGCTCTTGCAAGCAGGAACCACTGTGTCTCTGGAAACAACTAACAGTCTCTTGGATTT ACTGTGTTACTATGGTAACCAAGAGCCCTCAGCTAATTATAACTTTCAGCAACGCGAACA GTCAGAAGAATTGGAAGAGGCCACAGAGGCAGATAATGAGAAATCTAAGACGAAGGCGGG TCATCATCTCGGAGTTACTTGGAGAACAAAAAACAATGCTGAGAGAATCTTTGCTCTAAT GCCGGAGAAAAACGCACATTCCTACTGCACAATGATCCGGGGAATGGTGAAGCATCAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTATGCGAAGACACCAAAGATGGCGGCTGTGGCCTCGGCTCGCTGGCTGGGGGTCCGCAG CGGGCTTTGCTTACCTCTGACGGGTCGGCGGGTGGGTCCATGTGGACGGACCCCCAGAAG CAGATTTTATTCTGGAAGTGCAGCTCACCCAGAGGTTGAAGGTGCTAATGTAACAGGGAT TGAAGAAGTGGTCATTCCAAAAAAGAAAACTTGGGACAAAGTGGCCATTCTTCAGGCACT TGCATCCACAGTACACAGGGATAGCACAGCTGCCCCTTATGTGTTTCAAGATGATCCTTA TCTCATACCAACATCCTCTGTGGAATCTCATTCATTTTTGTTGGCAAAGAAGTCTGGGGA GAATGCAGCAAAATTTATTATTAATTCATACCCAAAATATTTTCAGAAGGACATAGCTGA ACCTCATATACCGTGTTTAATGCCCGAGTACTTTGAACCTCAGATTGAAGATGTAAGTGA GGCTGCCCTGCAGGAACGAATCAAACTCAGAAAGGTCAAAGCTTCTGTGGACATGTTTGA TCAGCTCTTGCAAGCAGGAACCACTGTGTCTCTGGAAACAACTAACAGTCTCTTGGATTT ACTGTGTTACTATGGTAACCAAGAGCCCTCAGCTAATTATAACTTTCAGCAACGCGAACA GTCAGAAGAATTGGAAGAGGCCACAGAGGCAGATAATGAGAAATCTAAGACGAAGGCGGG TCATCATCTCGGAGTTACTTGGAGAACAAAAAACAATGCTGAGAGAATCTTTGCTCTAAT GCCGGAGAAAAACGCACATTCCTACTGCACAATGATCCGGGGAATGGTGAAGCATCAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 51 entry(ies) | More info |
| Aligned organism(s): 51 entry(ies) | Help | Less info |
| 1-123, gnl|bosTau2|chr11 (33811641-33811519) | |
| 1-123, gnl|canFam2|chr17 (42064712-42064540) | |
| 1-123, gnl|canFam2|chr17 (42064675-42064560) | |
| 1-123, gnl|dasNov1|scaffold_157263 (3424-3599) | |
| 1-123, gnl|echTel1|scaffold_294410 (48591-48424) | |
| 1-123, gnl|hg17|chr19 (62378390-62378512) | |
| 1-123, gnl|hg17|chr2 (86244979-86245150) | |
| 1-123, gnl|Hg17|chr2 (86245010-86245132) | |
| 1-123, gnl|loxAfr1|scaffold_64860 (4756-4587) | |
| 1-123, gnl|loxAfr1|scaffold_64860 (4723-4607) | |
| 1-123, gnl|mm7|chr6 (71926720-71926564) | |
| 1-123, gnl|mm7|chr6 (71926694-71926582) | |
| 1-123, gnl|Mm7|chr6 (71926690-71926565) | |
| 1-123, gnl|monDom2|scaffold_63 (317470-317653) | |
| 1-123, gnl|oryCun1|scaffold_112174 (7016-7138) | |
| 1-123, gnl|oryCun1|scaffold_76754 (175-4) | |
| 1-123, gnl|panTro1|chr12 (89123998-89124169) | |
| 1-123, gnl|panTro1|chr20 (60111066-60111188) | |
| 1-123, gnl|rheMac2|chr13 (86691352-86691524) | |
| 1-123, gnl|rheMac2|chr13 (86691384-86691503) | |
| 1-123, gnl|rn3|chr4 (105431583-105431430) | |
| 1-123, gnl|rn3|chr4 (105431557-105431448) | |
| 433-558, gnl|bosTau2|chr11 (33797358-33797233) | |
| 433-558, gnl|canFam2|chr17 (42050823-42050663) | |
| 433-558, gnl|canFam2|chr17 (42050813-42050692) | |
| 433-558, gnl|danRer3|chr23 (13908142-13908282) | |
| 433-558, gnl|danRer3|chr23 (13908154-13908276) | |
| 433-558, gnl|dasNov1|scaffold_48636 (650-494) | |
| 433-558, gnl|dasNov1|scaffold_48636 (640-518) | |
| 433-558, gnl|echTel1|scaffold_267629 (557-397) | |
| 433-558, gnl|echTel1|scaffold_267629 (546-430) | |
| 433-558, gnl|fr1|chrUn (266045780-266045953) | |
| 433-558, gnl|galGal2|chr4 (85541352-85541535) | |
| 433-558, gnl|hg17|chr19 (62378824-62378946) | |
| 433-558, gnl|hg17|chr2 (86257692-86257852) | |
| 433-558, gnl|Hg17|chr2 (86257701-86257826) | |
| 433-558, gnl|loxAfr1|scaffold_88818 (29052-29213) | |
| 433-558, gnl|loxAfr1|scaffold_88818 (29063-29175) | |
| 433-558, gnl|mm7|chr6 (71919262-71919102) | |
| 433-558, gnl|mm7|chr6 (71919251-71919130) | |
| 433-558, gnl|Mm7|chr6 (71919251-71919126) | |
| 433-558, gnl|oryCun1|scaffold_112174 (7452-7574) | |
| 433-558, gnl|oryCun1|scaffold_210171 (244118-244278) | |
| 433-558, gnl|panTro1|chr12 (89136417-89136577) | |
| 433-558, gnl|panTro1|chr20 (60111500-60111622) | |
| 433-558, gnl|rheMac2|chr13 (86703112-86703273) | |
| 433-558, gnl|rheMac2|chr13 (86703123-86703243) | |
| 433-558, gnl|rn3|chr4 (105423345-105423186) | |
| 433-558, gnl|rn3|chr4 (105423335-105423215) | |
| 433-558, gnl|tetNig1|chrUn_random (135159163-135159296) | |
| 433-558, gnl|tetNig1|chrUn_random (135159165-135159287) |
| Aligned organism(s): 51 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-123, gnl|bosTau2|chr11 (33811641-33811519) | |
| 1-123, gnl|canFam2|chr17 (42064712-42064540) | |
| 1-123, gnl|canFam2|chr17 (42064675-42064560) | |
| 1-123, gnl|dasNov1|scaffold_157263 (3424-3599) | |
| 1-123, gnl|echTel1|scaffold_294410 (48591-48424) | |
| 1-123, gnl|hg17|chr19 (62378390-62378512) | |
| 1-123, gnl|hg17|chr2 (86244979-86245150) | |
| 1-123, gnl|Hg17|chr2 (86245010-86245132) | |
| 1-123, gnl|loxAfr1|scaffold_64860 (4756-4587) | |
| 1-123, gnl|loxAfr1|scaffold_64860 (4723-4607) | |
| 1-123, gnl|mm7|chr6 (71926720-71926564) | |
| 1-123, gnl|mm7|chr6 (71926694-71926582) | |
| 1-123, gnl|Mm7|chr6 (71926690-71926565) | |
| 1-123, gnl|monDom2|scaffold_63 (317470-317653) | |
| 1-123, gnl|oryCun1|scaffold_112174 (7016-7138) | |
| 1-123, gnl|oryCun1|scaffold_76754 (175-4) | |
| 1-123, gnl|panTro1|chr12 (89123998-89124169) | |
| 1-123, gnl|panTro1|chr20 (60111066-60111188) | |
| 1-123, gnl|rheMac2|chr13 (86691352-86691524) | |
| 1-123, gnl|rheMac2|chr13 (86691384-86691503) | |
| 1-123, gnl|rn3|chr4 (105431583-105431430) | |
| 1-123, gnl|rn3|chr4 (105431557-105431448) | |
| 433-558, gnl|bosTau2|chr11 (33797358-33797233) | |
| 433-558, gnl|canFam2|chr17 (42050823-42050663) | |
| 433-558, gnl|canFam2|chr17 (42050813-42050692) | |
| 433-558, gnl|danRer3|chr23 (13908142-13908282) | |
| 433-558, gnl|danRer3|chr23 (13908154-13908276) | |
| 433-558, gnl|dasNov1|scaffold_48636 (650-494) | |
| 433-558, gnl|dasNov1|scaffold_48636 (640-518) | |
| 433-558, gnl|echTel1|scaffold_267629 (557-397) | |
| 433-558, gnl|echTel1|scaffold_267629 (546-430) | |
| 433-558, gnl|fr1|chrUn (266045780-266045953) | |
| 433-558, gnl|galGal2|chr4 (85541352-85541535) | |
| 433-558, gnl|hg17|chr19 (62378824-62378946) | |
| 433-558, gnl|hg17|chr2 (86257692-86257852) | |
| 433-558, gnl|Hg17|chr2 (86257701-86257826) | |
| 433-558, gnl|loxAfr1|scaffold_88818 (29052-29213) | |
| 433-558, gnl|loxAfr1|scaffold_88818 (29063-29175) | |
| 433-558, gnl|mm7|chr6 (71919262-71919102) | |
| 433-558, gnl|mm7|chr6 (71919251-71919130) | |
| 433-558, gnl|Mm7|chr6 (71919251-71919126) | |
| 433-558, gnl|oryCun1|scaffold_112174 (7452-7574) | |
| 433-558, gnl|oryCun1|scaffold_210171 (244118-244278) | |
| 433-558, gnl|panTro1|chr12 (89136417-89136577) | |
| 433-558, gnl|panTro1|chr20 (60111500-60111622) | |
| 433-558, gnl|rheMac2|chr13 (86703112-86703273) | |
| 433-558, gnl|rheMac2|chr13 (86703123-86703243) | |
| 433-558, gnl|rn3|chr4 (105423345-105423186) | |
| 433-558, gnl|rn3|chr4 (105423335-105423215) | |
| 433-558, gnl|tetNig1|chrUn_random (135159163-135159296) | |
| 433-558, gnl|tetNig1|chrUn_random (135159165-135159287) |