Ss1.1-Pig3-SRG8012A06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTCTTAGAGGTTTGTGTTCCGGATCCTGAGTTTTCTGGAAAGTATTCTCCCCTCCTGTG CCTTGTCCTGTGGGTTCTACTTACAGGAGAACCAGAGGCTATCGGAAGATTTCGGGGGAC ACTTGCAGTGGAGGAGATGTCGAAGTACGCCTGGAAGGAGATCTGGTGCCGTGTCCTTGG GCAGAGGATAACGAGTTCATCCTGTACGCCATGCGCAAGTCCATCCACCGCTACGACCTG GCCTCCGGAACCACGGAGCAGTTGCCTCTCACCGGGTTGCGGGCAGCAGTGGCCTTATAC TTTGACTATGAGCACAACTGCTTGTACTGGTCCGACCTGGCCTTGGACATCATCCAGCGC CTCTGTTTGAATGGGAATACGGGCCAAGAGGTGATCATCAATTCTGGCCTGGAGACAGTA GAAGCCTTGGCTTTTGAACCCCTCATCCAGTTACTTTACTGGGTGGATTCTGGCTTCAAA AAGATTGAGGTGGGCAATCCAGACGGCGACTTCCGACTCACGATCGTCAATTCCTCTGTG CTTGATCGGCCCAGGGATATGGTTATCGTGCCCCAAGACGGGGTGATGTTCTGGACTGAC TGGGGTGACATGAGGCATGGCATTTACCGGAGCAACATGGATGGTTCGGCTGCCTATCGG CTCGTGTCGGAAGATGTCAAGTGGCCCAACGGCATCGCTGTGGACGCTCAGTGGGTCTAC TGGACGGACGCCTACATAGACTGTATCGAGCGGGTCACTTTCAGCGGCCAGCAGCGCTCC ATCATCCTGGACAACCTCCCGCACCCATATGCCATTGCCGTCTTTAAGAATGAGATCTAC TGGGATGACTGGTCAGAGCTCAGCATATTCCGAGCTTCCAAACACAGCAAGTCCGACATG GCGATTCTGGCGAGCCAGCTCACGGGGCCCATGGACCTGAAGATTTTCTACCGGGGGAAG ACGACGGGAAGCAACGCCTGTGTGTCCAGGCCGTGCAGCCTGCTGTGCCTGCCCAAGGCC AACAACACTAGAACCTGCCGGTGTCCAGATGGTGTTTCTGGCAGCGTCCTCCCGTCCGGG GACCTGATGTGCGAGTGCCCTCAGGGCTATCAGCTGAAGAACCACACGTGTGTCAAAGAA GAGAATACCTGTCTCCGCAACCAGTATCGGTGCAGCAACGGGAACTGTATCAACAGCATC TGGTGGTGTGATTTTGACAACGACTGTGGAGACATGAGCGACGAGAGGAACTGCCCTACT ACCGTCTGTGACCTGGACACCCAGTTCCGTTGCCAGGAGTCTGGGACCTGTATCCCGCTG TCCTACAAGTGTGACCTTGAGGATGACTGTGGTGACAATAGCGATGAGAGTCACTGTGAA CTGCACCAGTGCAGGAGCAATGAATACAGCTGCAGCTCTGGCATGTGCATCCGCTCCTCC TGGGTGTGTGACGGGGACAACGACTGCAGGGACTGGTCTGATGAAGCCAACTGTACTGGT CAGTATTTCCTGGACTCCCTGAGCAACGCTTACCCATTCGCATGCTTGGTAGCATTGTAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTCTTAGAGGTTTGTGTTCCGGATCCTGAGTTTTCTGGAAAGTATTCTCCCCTCCTGTG CCTTGTCCTGTGGGTTCTACTTACAGGAGAACCAGAGGCTATCGGAAGATTTCGGGGGAC ACTTGCAGTGGAGGAGATGTCGAAGTACGCCTGGAAGGAGATCTGGTGCCGTGTCCTTGG GCAGAGGATAACGAGTTCATCCTGTACGCCATGCGCAAGTCCATCCACCGCTACGACCTG GCCTCCGGAACCACGGAGCAGTTGCCTCTCACCGGGTTGCGGGCAGCAGTGGCCTTATAC TTTGACTATGAGCACAACTGCTTGTACTGGTCCGACCTGGCCTTGGACATCATCCAGCGC CTCTGTTTGAATGGGAATACGGGCCAAGAGGTGATCATCAATTCTGGCCTGGAGACAGTA GAAGCCTTGGCTTTTGAACCCCTCATCCAGTTACTTTACTGGGTGGATTCTGGCTTCAAA AAGATTGAGGTGGGCAATCCAGACGGCGACTTCCGACTCACGATCGTCAATTCCTCTGTG CTTGATCGGCCCAGGGATATGGTTATCGTGCCCCAAGACGGGGTGATGTTCTGGACTGAC TGGGGTGACATGAGGCATGGCATTTACCGGAGCAACATGGATGGTTCGGCTGCCTATCGG CTCGTGTCGGAAGATGTCAAGTGGCCCAACGGCATCGCTGTGGACGCTCAGTGGGTCTAC TGGACGGACGCCTACATAGACTGTATCGAGCGGGTCACTTTCAGCGGCCAGCAGCGCTCC ATCATCCTGGACAACCTCCCGCACCCATATGCCATTGCCGTCTTTAAGAATGAGATCTAC TGGGATGACTGGTCAGAGCTCAGCATATTCCGAGCTTCCAAACACAGCAAGTCCGACATG GCGATTCTGGCGAGCCAGCTCACGGGGCCCATGGACCTGAAGATTTTCTACCGGGGGAAG ACGACGGGAAGCAACGCCTGTGTGTCCAGGCCGTGCAGCCTGCTGTGCCTGCCCAAGGCC AACAACACTAGAACCTGCCGGTGTCCAGATGGTGTTTCTGGCAGCGTCCTCCCGTCCGGG GACCTGATGTGCGAGTGCCCTCAGGGCTATCAGCTGAAGAACCACACGTGTGTCAAAGAA GAGAATACCTGTCTCCGCAACCAGTATCGGTGCAGCAACGGGAACTGTATCAACAGCATC TGGTGGTGTGATTTTGACAACGACTGTGGAGACATGAGCGACGAGAGGAACTGCCCTACT ACCGTCTGTGACCTGGACACCCAGTTCCGTTGCCAGGAGTCTGGGACCTGTATCCCGCTG TCCTACAAGTGTGACCTTGAGGATGACTGTGGTGACAATAGCGATGAGAGTCACTGTGAA CTGCACCAGTGCAGGAGCAATGAATACAGCTGCAGCTCTGGCATGTGCATCCGCTCCTCC TGGGTGTGTGACGGGGACAACGACTGCAGGGACTGGTCTGATGAAGCCAACTGTACTGGT CAGTATTTCCTGGACTCCCTGAGCAACGCTTACCCATTCGCATGCTTGGTAGCATTGTAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 162-357, gnl|bosTau2|chr15 (18409125-18409320) | |
| 162-357, gnl|Hg17|chr11 (120929834-120930028) | |
| 162-357, gnl|Mm7|chr9 (41971610-41971419) | |
| 581-828, gnl|bosTau2|chr15 (18414492-18414739) | |
| 581-828, gnl|canFam2|chr5 (15564867-15564598) | |
| 581-828, gnl|danRer3|chr15 (24583757-24584024) | |
| 581-828, gnl|dasNov1|scaffold_212557 (470-739) | |
| 581-828, gnl|fr1|chrUn (125064975-125064714) | |
| 581-828, gnl|galGal2|chr24 (3423977-3423725) | |
| 581-828, gnl|hg17|chr11 (120934492-120934761) | |
| 581-828, gnl|Hg17|chr11 (120934509-120934756) | |
| 581-828, gnl|loxAfr1|scaffold_57921 (4105-4374) | |
| 581-828, gnl|mm7|chr9 (41966305-41966036) | |
| 581-828, gnl|Mm7|chr9 (41966286-41966039) | |
| 581-828, gnl|monDom2|scaffold_2 (115639806-115639536) | |
| 581-828, gnl|oryCun1|scaffold_172873 (22524-22255) | |
| 581-828, gnl|panTro1|chr9 (122982171-122982440) | |
| 581-828, gnl|rheMac2|chr14 (119985833-119986102) | |
| 581-828, gnl|rn3|chr8_random (379766-380035) | |
| 581-828, gnl|tetNig1|chr16 (8226428-8226686) | |
| 581-828, gnl|xenTro1|scaffold_999 (165823-165570) | |
| 967-1141, gnl|bosTau2|chr15 (18421400-18421574) | |
| 967-1141, gnl|canFam2|chr5 (15558356-15558133) | |
| 967-1141, gnl|danRer3|chr15 (24587026-24587215) | |
| 967-1141, gnl|echTel1|scaffold_312208 (78713-78497) | |
| 967-1141, gnl|fr1|chrUn (125064432-125064246) | |
| 967-1141, gnl|galGal2|chr24 (3423078-3422856) | |
| 967-1141, gnl|hg17|chr11 (120942841-120943057) | |
| 967-1141, gnl|Hg17|chr11 (120942858-120943032) | |
| 967-1141, gnl|loxAfr1|scaffold_298 (111674-111845) | |
| 967-1141, gnl|mm7|chr9 (41958862-41958647) | |
| 967-1141, gnl|Mm7|chr9 (41958840-41958666) | |
| 967-1141, gnl|monDom2|scaffold_2 (115625035-115624819) | |
| 967-1141, gnl|oryCun1|scaffold_172873 (14865-14651) | |
| 967-1141, gnl|panTro1|chr9 (122990508-122990724) | |
| 967-1141, gnl|rheMac2|chr14 (119993920-119994136) | |
| 967-1141, gnl|rn3|chr8_random (385084-385298) | |
| 967-1141, gnl|tetNig1|chr16 (8226955-8227133) | |
| 967-1141, gnl|xenTro1|scaffold_999 (162075-161880) | |
| 1378-1556, gnl|bosTau2|chr15 (18430530-18430709) | |
| 1378-1556, gnl|canFam2|chr5 (15549910-15549753) | |
| 1378-1556, gnl|danRer3|chr15 (24589966-24590121) | |
| 1378-1556, gnl|dasNov1|scaffold_8702 (48477-48374) | |
| 1378-1556, gnl|echTel1|scaffold_312208 (62160-62005) | |
| 1378-1556, gnl|fr1|chrUn (125064032-125063890) | |
| 1378-1556, gnl|galGal2|chr24 (3421670-3421515) | |
| 1378-1556, gnl|hg17|chr11 (120953175-120953330) | |
| 1378-1556, gnl|Hg17|chr11 (120953199-120953377) | |
| 1378-1556, gnl|loxAfr1|scaffold_298 (121101-121256) | |
| 1378-1556, gnl|mm7|chr9 (41948971-41948816) | |
| 1378-1556, gnl|monDom2|scaffold_2 (115608772-115608620) | |
| 1378-1556, gnl|oryCun1|scaffold_172873 (4823-4670) | |
| 1378-1556, gnl|panTro1|chr9 (123000838-123000993) | |
| 1378-1556, gnl|rheMac2|chr14 (120003441-120003596) | |
| 1378-1556, gnl|rn3|chr8 (45017953-45017798) | |
| 1378-1556, gnl|tetNig1|chr16 (8227627-8227749) | |
| 1378-1556, gnl|xenTro1|scaffold_999 (156704-156564) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 162-357, gnl|bosTau2|chr15 (18409125-18409320) | |
| 162-357, gnl|Hg17|chr11 (120929834-120930028) | |
| 162-357, gnl|Mm7|chr9 (41971610-41971419) | |
| 581-828, gnl|bosTau2|chr15 (18414492-18414739) | |
| 581-828, gnl|canFam2|chr5 (15564867-15564598) | |
| 581-828, gnl|danRer3|chr15 (24583757-24584024) | |
| 581-828, gnl|dasNov1|scaffold_212557 (470-739) | |
| 581-828, gnl|fr1|chrUn (125064975-125064714) | |
| 581-828, gnl|galGal2|chr24 (3423977-3423725) | |
| 581-828, gnl|hg17|chr11 (120934492-120934761) | |
| 581-828, gnl|Hg17|chr11 (120934509-120934756) | |
| 581-828, gnl|loxAfr1|scaffold_57921 (4105-4374) | |
| 581-828, gnl|mm7|chr9 (41966305-41966036) | |
| 581-828, gnl|Mm7|chr9 (41966286-41966039) | |
| 581-828, gnl|monDom2|scaffold_2 (115639806-115639536) | |
| 581-828, gnl|oryCun1|scaffold_172873 (22524-22255) | |
| 581-828, gnl|panTro1|chr9 (122982171-122982440) | |
| 581-828, gnl|rheMac2|chr14 (119985833-119986102) | |
| 581-828, gnl|rn3|chr8_random (379766-380035) | |
| 581-828, gnl|tetNig1|chr16 (8226428-8226686) | |
| 581-828, gnl|xenTro1|scaffold_999 (165823-165570) | |
| 967-1141, gnl|bosTau2|chr15 (18421400-18421574) | |
| 967-1141, gnl|canFam2|chr5 (15558356-15558133) | |
| 967-1141, gnl|danRer3|chr15 (24587026-24587215) | |
| 967-1141, gnl|echTel1|scaffold_312208 (78713-78497) | |
| 967-1141, gnl|fr1|chrUn (125064432-125064246) | |
| 967-1141, gnl|galGal2|chr24 (3423078-3422856) | |
| 967-1141, gnl|hg17|chr11 (120942841-120943057) | |
| 967-1141, gnl|Hg17|chr11 (120942858-120943032) | |
| 967-1141, gnl|loxAfr1|scaffold_298 (111674-111845) | |
| 967-1141, gnl|mm7|chr9 (41958862-41958647) | |
| 967-1141, gnl|Mm7|chr9 (41958840-41958666) | |
| 967-1141, gnl|monDom2|scaffold_2 (115625035-115624819) | |
| 967-1141, gnl|oryCun1|scaffold_172873 (14865-14651) | |
| 967-1141, gnl|panTro1|chr9 (122990508-122990724) | |
| 967-1141, gnl|rheMac2|chr14 (119993920-119994136) | |
| 967-1141, gnl|rn3|chr8_random (385084-385298) | |
| 967-1141, gnl|tetNig1|chr16 (8226955-8227133) | |
| 967-1141, gnl|xenTro1|scaffold_999 (162075-161880) | |
| 1378-1556, gnl|bosTau2|chr15 (18430530-18430709) | |
| 1378-1556, gnl|canFam2|chr5 (15549910-15549753) | |
| 1378-1556, gnl|danRer3|chr15 (24589966-24590121) | |
| 1378-1556, gnl|dasNov1|scaffold_8702 (48477-48374) | |
| 1378-1556, gnl|echTel1|scaffold_312208 (62160-62005) | |
| 1378-1556, gnl|fr1|chrUn (125064032-125063890) | |
| 1378-1556, gnl|galGal2|chr24 (3421670-3421515) | |
| 1378-1556, gnl|hg17|chr11 (120953175-120953330) | |
| 1378-1556, gnl|Hg17|chr11 (120953199-120953377) | |
| 1378-1556, gnl|loxAfr1|scaffold_298 (121101-121256) | |
| 1378-1556, gnl|mm7|chr9 (41948971-41948816) | |
| 1378-1556, gnl|monDom2|scaffold_2 (115608772-115608620) | |
| 1378-1556, gnl|oryCun1|scaffold_172873 (4823-4670) | |
| 1378-1556, gnl|panTro1|chr9 (123000838-123000993) | |
| 1378-1556, gnl|rheMac2|chr14 (120003441-120003596) | |
| 1378-1556, gnl|rn3|chr8 (45017953-45017798) | |
| 1378-1556, gnl|tetNig1|chr16 (8227627-8227749) | |
| 1378-1556, gnl|xenTro1|scaffold_999 (156704-156564) |