Non-Coding RNA Search

Ss1.1-Pig3-SRG8012K08.5

Sequence:


               
               GTGATTTCCAGAAGAAGTAGAAAGATCCAGAACCAGGCTGTTAACGTTTCTACCAGAATC
AGAAGCCTAAAGGAATCTTTTACACATGTATTTGATCATGACACTCCCCTGCATGAAAGT
CTTCTCTTCAAATTGTATTTAGAATGTAATCTAAATCTTTAATATGTAAAATCTTGAATA
TGGCCTGCAGTGAGTTCTAAAGTGCAGTCTGTACTTACCAACTGTACAGCAGACTGTCCT
CCACTCTCCCATAAGCCCTTCCCCTCCACACTCATCTTTCAGTTTCTTAAGTAAGTAATC
ATTTTATATGAGTCAGTGTCCGGTCCTTATAAGCTGCCTGCCATTGTCAAAGGTTGGGAA
ACTGGAGATGGTAATTTAGAAATGGTCCACCAGGTGGGGGAGCTAGGGTCACCAGATTTA
GCAAGACCACAATCCCAAGTATTGCATGAAACATACTAAAAATTATTTGTTGTAAAACTG
AAATCCAAATTTAACTGGGTGTCTTGTATTTTATCTGGCAGTCCAAAGCTGCCGTGGAAG
CAGCTGCAGGTGTGAAAAGTGTGGCCTGAGAGTGCAGTTGGGGCAGGTCCTGGGAACCAC
TGAGGGGAGCACCACTGGGTCTTCTGTGCACTGGTCCACTGGCTCCGGCAGTGAATAAAA
AGAAAAAGAACCAGGACCCGTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGATTTCCAGAAGAAGTAGAAAGATCCAGAACCAGGCTGTTAACGTTTCTACCAGAATC
AGAAGCCTAAAGGAATCTTTTACACATGTATTTGATCATGACACTCCCCTGCATGAAAGT
CTTCTCTTCAAATTGTATTTAGAATGTAATCTAAATCTTTAATATGTAAAATCTTGAATA
TGGCCTGCAGTGAGTTCTAAAGTGCAGTCTGTACTTACCAACTGTACAGCAGACTGTCCT
CCACTCTCCCATAAGCCCTTCCCCTCCACACTCATCTTTCAGTTTCTTAAGTAAGTAATC
ATTTTATATGAGTCAGTGTCCGGTCCTTATAAGCTGCCTGCCATTGTCAAAGGTTGGGAA
ACTGGAGATGGTAATTTAGAAATGGTCCACCAGGTGGGGGAGCTAGGGTCACCAGATTTA
GCAAGACCACAATCCCAAGTATTGCATGAAACATACTAAAAATTATTTGTTGTAAAACTG
AAATCCAAATTTAACTGGGTGTCTTGTATTTTATCTGGCAGTCCAAAGCTGCCGTGGAAG
CAGCTGCAGGTGTGAAAAGTGTGGCCTGAGAGTGCAGTTGGGGCAGGTCCTGGGAACCAC
TGAGGGGAGCACCACTGGGTCTTCTGTGCACTGGTCCACTGGCTCCGGCAGTGAATAAAA
AGAAAAAGAACCAGGACCCGTAAA

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               1-155, gnl|bosTau2|chr11 (49495374-49495217)
               


               
               375-521, gnl|bosTau2|chr11 (49494624-49494474)
               

               
               375-521, gnl|hg17|chr2 (70338513-70338646)
               

               
               375-521, gnl|loxAfr1|scaffold_115900 (6108-6033)
               

               
               375-521, gnl|panTro1|chr12 (72650174-72650304)
               

               
               375-521, gnl|rheMac2|chr13 (70479122-70479240)
               


               
               523-683, gnl|bosTau2|chr11 (49494445-49494286)
               

               
               523-683, gnl|Hg17|chr2 (70338488-70338338)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-155, gnl|bosTau2|chr11 (49495374-49495217)
               


               
               375-521, gnl|bosTau2|chr11 (49494624-49494474)
               

               
               375-521, gnl|hg17|chr2 (70338513-70338646)
               

               
               375-521, gnl|loxAfr1|scaffold_115900 (6108-6033)
               

               
               375-521, gnl|panTro1|chr12 (72650174-72650304)
               

               
               375-521, gnl|rheMac2|chr13 (70479122-70479240)
               


               
               523-683, gnl|bosTau2|chr11 (49494445-49494286)
               

               
               523-683, gnl|Hg17|chr2 (70338488-70338338)

	1-155, gnl\|bosTau2\|chr11 (49495374-49495217)

	375-521, gnl\|bosTau2\|chr11 (49494624-49494474)
	375-521, gnl\|hg17\|chr2 (70338513-70338646)
	375-521, gnl\|loxAfr1\|scaffold_115900 (6108-6033)
	375-521, gnl\|panTro1\|chr12 (72650174-72650304)
	375-521, gnl\|rheMac2\|chr13 (70479122-70479240)

	523-683, gnl\|bosTau2\|chr11 (49494445-49494286)
	523-683, gnl\|Hg17\|chr2 (70338488-70338338)