Non-Coding RNA Search

Ss1.1-Pig3-SRG8012K24.3

Sequence:


               
               AACCGCCCATCGAAGCAGTGGCTGAACAGAAAAACCCTGCATTGTACACGCTGCTGGGTG
GTAAAAGTACACCCGTAAGCCAGCTTGGTTCTGCAGACTTTCCCGAGCCCCCTGATCCAT
TCCAGCCACTCGGGGCTGACAGCAGTGACCCGTTCCAAAATAAAAAGGGGTTTGGGGACC
CGGGGAGTGGAAAAGATCCATTTGCTCCCTCCTCTTCAGCTAAATCTTCTAAAGCCTCTT
CCTTGGGCTTTGCAGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCA
AGCGGGATATTGAGAAGGCGGAGCATGATATACTGGCGAGGCTGCGGAGGCAGGATCATG
ATGACCTGGAGCTGGCCATCGCGCTCATCAAGGCTGACATGCCCGCCGCCTATGCGTGGC
CTCACGCACGTGCCCACTGGATGGATGGCCGTGGGGCAGGCATGCAACAGCAGAGGAATG
GAAGTTTCTGTGTATATACACACACGATCAGTATCAGCAGTCCCCAGATCATGTGACACG
TCACAGCCACTGTTATGTGAAGGACTCGCTGGCCGGTCAGAGGGCATCGGGATATGAGAG
GCTGGCCATGGGGCGAGGGATCAGCTCACGCCTGTGGAGGCAGCCATGGGATATGCCTCC
ATGCTGTGACATCCATGCCTCCATCCTGGAACCAGCAGAGTGCAGGACAAGAAGAGCAAG
CGCCCGTCTCCTGCCCTCCATGCCATGATATCAGCCAGGCCAGCACCAGGGCCCGGGGCG
TACCCCCCCCATACCCATGACCTCCCCATGAGACAGACACCCTGGTGATGTATGCAGTCA
TTGTATAAAAATTAAGTTTGAATGATTAATATAAAATATTTTAATGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCGCCCATCGAAGCAGTGGCTGAACAGAAAAACCCTGCATTGTACACGCTGCTGGGTG
GTAAAAGTACACCCGTAAGCCAGCTTGGTTCTGCAGACTTTCCCGAGCCCCCTGATCCAT
TCCAGCCACTCGGGGCTGACAGCAGTGACCCGTTCCAAAATAAAAAGGGGTTTGGGGACC
CGGGGAGTGGAAAAGATCCATTTGCTCCCTCCTCTTCAGCTAAATCTTCTAAAGCCTCTT
CCTTGGGCTTTGCAGACTTCACCTCTTTTGGCAATGAGGAGCAGCAGCTGGCGTGGGCCA
AGCGGGATATTGAGAAGGCGGAGCATGATATACTGGCGAGGCTGCGGAGGCAGGATCATG
ATGACCTGGAGCTGGCCATCGCGCTCATCAAGGCTGACATGCCCGCCGCCTATGCGTGGC
CTCACGCACGTGCCCACTGGATGGATGGCCGTGGGGCAGGCATGCAACAGCAGAGGAATG
GAAGTTTCTGTGTATATACACACACGATCAGTATCAGCAGTCCCCAGATCATGTGACACG
TCACAGCCACTGTTATGTGAAGGACTCGCTGGCCGGTCAGAGGGCATCGGGATATGAGAG
GCTGGCCATGGGGCGAGGGATCAGCTCACGCCTGTGGAGGCAGCCATGGGATATGCCTCC
ATGCTGTGACATCCATGCCTCCATCCTGGAACCAGCAGAGTGCAGGACAAGAAGAGCAAG
CGCCCGTCTCCTGCCCTCCATGCCATGATATCAGCCAGGCCAGCACCAGGGCCCGGGGCG
TACCCCCCCCATACCCATGACCTCCCCATGAGACAGACACCCTGGTGATGTATGCAGTCA
TTGTATAAAAATTAAGTTTGAATGATTAATATAAAATATTTTAATGCA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61865824|ref|XP_613159.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61865824|ref|XP_613159.1|

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               60-266, gnl|bosTau2|chr7 (5597154-5596948)
               

               
               60-266, gnl|Hg17|chr19 (16333796-16333590)
               

               
               60-266, gnl|Mm7|chr8 (70869067-70868861)
               


               
               267-888, gnl|bosTau2|chr7 (5592019-5591415)
               

               
               267-888, gnl|Hg17|chr19 (16327662-16327062)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-266, gnl|bosTau2|chr7 (5597154-5596948)
               

               
               60-266, gnl|Hg17|chr19 (16333796-16333590)
               

               
               60-266, gnl|Mm7|chr8 (70869067-70868861)
               


               
               267-888, gnl|bosTau2|chr7 (5592019-5591415)
               

               
               267-888, gnl|Hg17|chr19 (16327662-16327062)

	60-266, gnl\|bosTau2\|chr7 (5597154-5596948)
	60-266, gnl\|Hg17\|chr19 (16333796-16333590)
	60-266, gnl\|Mm7\|chr8 (70869067-70868861)

	267-888, gnl\|bosTau2\|chr7 (5592019-5591415)
	267-888, gnl\|Hg17\|chr19 (16327662-16327062)