Ss1.1-Pig3-SRG8013C14.5
|
CCCGGGAGCCTCAGGACCCGTCCTCCTTCCCCAGTGGTTTTCGCCTTCCGACGCCCACCT
GGAGCATCTCGGGTCGCCCCGGAGGGTGGCTGGAGGGGGCAGGGGCCGAGCGGGTGGGTG
GGTGGTTGGTGCTGCTTTCCTCTGCTCCCTNAGGTTGGCCGTGGTTCCCACCGGGCTCCA
TCGAGCCCCCCTCGTGAGCCCGCTCCAAACGCCGTTCCTAGCCAGCTTTTTCTTTTTGCT
TTCCCCACAAAATCTGGGGGCCCTGCAAGTTGCGTTGTTGGGTTATGCTGGGGGAGCTCT
AGCAGTGCTTTCAGTAGAAAGGAAGAGAAAACCTTGGGGGACACGCCCCCCAGTCTGAAG
CAGAGAGATTGTGTAACCCCTCCAATATCATCCTCACCTTCGTCGTTATTTGTTGTGCTC
AGCGTTGAGATGTGCTTCGGAGCCTGGGGTATTTTTCTCAATTGAAGGAGATTTAAAAGT
AATCTAAAAATTTTTCAGATTAAAGATTCCACTTTAGGAATGAAGGATAAGTGGGTTAGT
TATCTGGTACCTTGTTTTTCAGCCCTGTGTTGATATTGATACACCTTTTAAGCTTTGCTT
TCTCTGCAATTTGTTCATATTAGAAGGATGTCAGTCTTGTTTTATTTGGTGCTTACCATC
ATATTCTCATTTGAGTGCGTATCATTAGTGTATAGGACCTTGGAGGATATTGCGCTTCGC
CGTTGTAATTTTTGGAGAAATGATGGGGGAAAAAATCTTAGCTTTGAATGTTTAAAAAAA
ACTTTGCTGAAAATATATAGCTATGCCTTTGGTGGAACTGGTAAACAATGGAGGTAGGAG
GAAGGTTTGTTGGTAACTGTAATTTTTATTGTTGTTGGTTGATGATCTTCAGAAGTAAAC |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCGGGAGCCTCAGGACCCGTCCTCCTTCCCCAGTGGTTTTCGCCTTCCGACGCCCACCT
GGAGCATCTCGGGTCGCCCCGGAGGGTGGCTGGAGGGGGCAGGGGCCGAGCGGGTGGGTG
GGTGGTTGGTGCTGCTTTCCTCTGCTCCCTNAGGTTGGCCGTGGTTCCCACCGGGCTCCA
TCGAGCCCCCCTCGTGAGCCCGCTCCAAACGCCGTTCCTAGCCAGCTTTTTCTTTTTGCT
TTCCCCACAAAATCTGGGGGCCCTGCAAGTTGCGTTGTTGGGTTATGCTGGGGGAGCTCT
AGCAGTGCTTTCAGTAGAAAGGAAGAGAAAACCTTGGGGGACACGCCCCCCAGTCTGAAG
CAGAGAGATTGTGTAACCCCTCCAATATCATCCTCACCTTCGTCGTTATTTGTTGTGCTC
AGCGTTGAGATGTGCTTCGGAGCCTGGGGTATTTTTCTCAATTGAAGGAGATTTAAAAGT
AATCTAAAAATTTTTCAGATTAAAGATTCCACTTTAGGAATGAAGGATAAGTGGGTTAGT
TATCTGGTACCTTGTTTTTCAGCCCTGTGTTGATATTGATACACCTTTTAAGCTTTGCTT
TCTCTGCAATTTGTTCATATTAGAAGGATGTCAGTCTTGTTTTATTTGGTGCTTACCATC
ATATTCTCATTTGAGTGCGTATCATTAGTGTATAGGACCTTGGAGGATATTGCGCTTCGC
CGTTGTAATTTTTGGAGAAATGATGGGGGAAAAAATCTTAGCTTTGAATGTTTAAAAAAA
ACTTTGCTGAAAATATATAGCTATGCCTTTGGTGGAACTGGTAAACAATGGAGGTAGGAG
GAAGGTTTGTTGGTAACTGTAATTTTTATTGTTGTTGGTTGATGATCTTCAGAAGTAAAC |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-116, gnl|bosTau2|chr4 (59803209-59803093) |
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1-116, gnl|Hg17|chr7 (138373985-138374099) |
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1-116, gnl|Mm7|chr6 (38365560-38365666) |
| |
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228-898, gnl|bosTau2|chr4 (59802948-59802287) |
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228-898, gnl|canFam2|chr16 (12473408-12472593) |
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228-898, gnl|dasNov1|scaffold_42599 (2353-3177) |
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228-898, gnl|hg17|chr7 (138374160-138374949) |
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228-898, gnl|Hg17|chr7 (138374241-138374917) |
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228-898, gnl|loxAfr1|scaffold_529 (137792-137026) |
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228-898, gnl|mm7|chr6 (38365697-38366483) |
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228-898, gnl|Mm7|chr6 (38365759-38366447) |
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228-898, gnl|monDom2|scaffold_22 (3152272-3151505) |
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228-898, gnl|panTro1|chr6 (141125394-141126182) |
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228-898, gnl|rheMac2|chr3 (176729009-176729800) |
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228-898, gnl|rn3|chr4 (66276378-66277125) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-116, gnl|bosTau2|chr4 (59803209-59803093) |
|
1-116, gnl|Hg17|chr7 (138373985-138374099) |
|
1-116, gnl|Mm7|chr6 (38365560-38365666) |
| |
|
228-898, gnl|bosTau2|chr4 (59802948-59802287) |
|
228-898, gnl|canFam2|chr16 (12473408-12472593) |
|
228-898, gnl|dasNov1|scaffold_42599 (2353-3177) |
|
228-898, gnl|hg17|chr7 (138374160-138374949) |
|
228-898, gnl|Hg17|chr7 (138374241-138374917) |
|
228-898, gnl|loxAfr1|scaffold_529 (137792-137026) |
|
228-898, gnl|mm7|chr6 (38365697-38366483) |
|
228-898, gnl|Mm7|chr6 (38365759-38366447) |
|
228-898, gnl|monDom2|scaffold_22 (3152272-3151505) |
|
228-898, gnl|panTro1|chr6 (141125394-141126182) |
|
228-898, gnl|rheMac2|chr3 (176729009-176729800) |
|
228-898, gnl|rn3|chr4 (66276378-66277125) |
