Non-Coding RNA Search

Ss1.1-Pig3-SRG8013O02.5

Sequence:


               
               CTTTGTCAAAGCAGTGCACTCTTGCTTTGAAAACAGGAAGGTAGAACATTCCAACAGCAT
CATGAGCCCTCTGTTTATATTTGTAAAATCTGTAGTCTTTCCAGGCCTCTAGGCAAGAGC
AAATCAAAATAATCAGAGGCATTAGACTTGATTATGTTGAATTGGATTCTTATAACTGAG
GCTTGATCGCCAAAATTAGTGGTGTGCTAGTTTATACTGAAAGAGACGCTTGCAATATTG
CAAAACCATAGACTCCAGCTTGCTGGAATCTTTAAAGGCATCTGGATATTTTGAAAAATA
CAACAATCACATGCTTTTTCTTATCTCCATAATTGTATTCTTTTGAAAAGCGAGCTGTGT
AAGGACAGGGGATGGGGGTAGATGGGAAGGCTGTGGTATTTGGATCCAGATGGGTGAATT
TGAATCTGGTTCTGCCTCAGCCAGCTAGGGTAACCTGAACATGTTTTTTCATCTTAGTGT
TTACTTCCTCCATTTTTAAATAAAGGAAAAATAACTCATATCTCATAGGATCACTGTGAC
TAATAGATTAGGTGGTGCCTGACACACAGTGAGTACTCGTAAGCTTTAGTTCTCTTCCCT
TTTGCACTCCAGCTTGGAAGAACATGAATGCTGTGGTTTTTCTGCTATTTTTTTCCTGCC
TAGATAAGGCAGTTCTATAATAGTGTGTCACTGTTTCCCCAAAGGATCCCTCTGTGGGCC
CACGGTACCTCTTCCTCAGATTCTCCATAACAGTATTTCTGGGGTCCAAAAGAGGATACA
ATACCTTAGAAATAGTCATCACTTTATTTCAGTTAGGATACTTCCCATTGAAGCACTCTT
AAAATCCCTTTGCTTTCGGGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTGTCAAAGCAGTGCACTCTTGCTTTGAAAACAGGAAGGTAGAACATTCCAACAGCAT
CATGAGCCCTCTGTTTATATTTGTAAAATCTGTAGTCTTTCCAGGCCTCTAGGCAAGAGC
AAATCAAAATAATCAGAGGCATTAGACTTGATTATGTTGAATTGGATTCTTATAACTGAG
GCTTGATCGCCAAAATTAGTGGTGTGCTAGTTTATACTGAAAGAGACGCTTGCAATATTG
CAAAACCATAGACTCCAGCTTGCTGGAATCTTTAAAGGCATCTGGATATTTTGAAAAATA
CAACAATCACATGCTTTTTCTTATCTCCATAATTGTATTCTTTTGAAAAGCGAGCTGTGT
AAGGACAGGGGATGGGGGTAGATGGGAAGGCTGTGGTATTTGGATCCAGATGGGTGAATT
TGAATCTGGTTCTGCCTCAGCCAGCTAGGGTAACCTGAACATGTTTTTTCATCTTAGTGT
TTACTTCCTCCATTTTTAAATAAAGGAAAAATAACTCATATCTCATAGGATCACTGTGAC
TAATAGATTAGGTGGTGCCTGACACACAGTGAGTACTCGTAAGCTTTAGTTCTCTTCCCT
TTTGCACTCCAGCTTGGAAGAACATGAATGCTGTGGTTTTTCTGCTATTTTTTTCCTGCC
TAGATAAGGCAGTTCTATAATAGTGTGTCACTGTTTCCCCAAAGGATCCCTCTGTGGGCC
CACGGTACCTCTTCCTCAGATTCTCCATAACAGTATTTCTGGGGTCCAAAAGAGGATACA
ATACCTTAGAAATAGTCATCACTTTATTTCAGTTAGGATACTTCCCATTGAAGCACTCTT
AAAATCCCTTTGCTTTCGGGAAAA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-421, gnl|bosTau2|chr10 (65486520-65486099)
               

               
               1-421, gnl|Hg17|chr14 (85084445-85084804)
               

               
               1-421, gnl|Mm7|chr12 (93188580-93188986)
               


               
               553-863, gnl|bosTau2|chr10 (65485383-65485066)
               

               
               553-863, gnl|Hg17|chr14 (85085819-85086138)
               

               
               553-863, gnl|Mm7|chr12 (93189105-93189409)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-421, gnl|bosTau2|chr10 (65486520-65486099)
               

               
               1-421, gnl|Hg17|chr14 (85084445-85084804)
               

               
               1-421, gnl|Mm7|chr12 (93188580-93188986)
               


               
               553-863, gnl|bosTau2|chr10 (65485383-65485066)
               

               
               553-863, gnl|Hg17|chr14 (85085819-85086138)
               

               
               553-863, gnl|Mm7|chr12 (93189105-93189409)

	1-421, gnl\|bosTau2\|chr10 (65486520-65486099)
	1-421, gnl\|Hg17\|chr14 (85084445-85084804)
	1-421, gnl\|Mm7\|chr12 (93188580-93188986)

	553-863, gnl\|bosTau2\|chr10 (65485383-65485066)
	553-863, gnl\|Hg17\|chr14 (85085819-85086138)
	553-863, gnl\|Mm7\|chr12 (93189105-93189409)