Ss1.1-Pig3-SRG8013P14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTCAGTGAAGCAGCAGCTGTGGAGGGGCCTGCGGACAGCAGGGGCTGAGACAATTGCCT GGACATAGGAGACACGTTAAAACAAATTCCAGGATCACTTCCTCACCTCACTGGTCAGCA AGGAAAACACCTGTTGAGAAAGAACCAAGTGCCATACGCCATTCGTGTATGCGGTTCCAT ACCGAATCCTTCACATTCAGTTCATGGTCCTCTCTCATCGCCTCGTTTTTTCCCCCCCTT CCCAATGGCATAAATGTGAGCCAAAGCAGCTCTAAGCAGTTAGTTGCCCTGGCAAAAGGG AGCCTATTTAGCTCATCTCCAAATGAAATACAAGGACCTCTGCGGACACACTGTGATAGT GAATTCTCGTCAGGTGGATAATCAGGAGTAGGCTTGAATTCTCCAAGTATGAAAGCGAGG TGTCTGTCTTGGTCGTTGGTTTCTACACGGTTCATGCAACATTTGCTAAGAAATCAGAGG CGACGGTGACAGATGCCTTTTGCCTTTTCCATGCGTCTTATGAGCTCTGCTGGAGTCGTT AGCTGGGCTTGCTGGCTTCTCNCAGGGTTATCTTCTTCATCTTGGAGGATGGGGCAGGTT GAGCTGGTTGCTGCCAGCTTCTTGAAAGCATTCCCAGATGGGAATGAATGTTTCTGCCCG GTGGTTGGAAGAGGAAGAATTTCTAGGGAGGAGTTCATGTTGGGTCTAGTTCCCATCACT AATTAAAATCTGCAGGTAATGGGTTCCTAATTTGTTGGTTCCTTTTATCATGTTATTGCC TTTTGAGGACTTGGGGGATAAGGTCATGTTATGATATAGCTCTTGGCTGTTGGGGGTGTT AGATGCTTGGCAATGACCTGCAGACCCACCTGCTTGGTTCTCTTTCTCTGAGCCAGTATC CTGGAGGACAGGGTTCAGAAGGACGTTTCACGCTGGGTCCCTAACTGGTGGAAAACCAAG CCAAGCTGAACCGTGCTGCTCTTACATTTAAGCAGAAGAGAGCCGTGGCTCACTGAGCAA TGCTTCCTTCCCCAGAAGGAAATTCATAATTGGTCCCATCGACCCTCTTGCCTGTTGGCT TTGCCAGTAGCAGGACCAGGTGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTCAGTGAAGCAGCAGCTGTGGAGGGGCCTGCGGACAGCAGGGGCTGAGACAATTGCCT GGACATAGGAGACACGTTAAAACAAATTCCAGGATCACTTCCTCACCTCACTGGTCAGCA AGGAAAACACCTGTTGAGAAAGAACCAAGTGCCATACGCCATTCGTGTATGCGGTTCCAT ACCGAATCCTTCACATTCAGTTCATGGTCCTCTCTCATCGCCTCGTTTTTTCCCCCCCTT CCCAATGGCATAAATGTGAGCCAAAGCAGCTCTAAGCAGTTAGTTGCCCTGGCAAAAGGG AGCCTATTTAGCTCATCTCCAAATGAAATACAAGGACCTCTGCGGACACACTGTGATAGT GAATTCTCGTCAGGTGGATAATCAGGAGTAGGCTTGAATTCTCCAAGTATGAAAGCGAGG TGTCTGTCTTGGTCGTTGGTTTCTACACGGTTCATGCAACATTTGCTAAGAAATCAGAGG CGACGGTGACAGATGCCTTTTGCCTTTTCCATGCGTCTTATGAGCTCTGCTGGAGTCGTT AGCTGGGCTTGCTGGCTTCTCNCAGGGTTATCTTCTTCATCTTGGAGGATGGGGCAGGTT GAGCTGGTTGCTGCCAGCTTCTTGAAAGCATTCCCAGATGGGAATGAATGTTTCTGCCCG GTGGTTGGAAGAGGAAGAATTTCTAGGGAGGAGTTCATGTTGGGTCTAGTTCCCATCACT AATTAAAATCTGCAGGTAATGGGTTCCTAATTTGTTGGTTCCTTTTATCATGTTATTGCC TTTTGAGGACTTGGGGGATAAGGTCATGTTATGATATAGCTCTTGGCTGTTGGGGGTGTT AGATGCTTGGCAATGACCTGCAGACCCACCTGCTTGGTTCTCTTTCTCTGAGCCAGTATC CTGGAGGACAGGGTTCAGAAGGACGTTTCACGCTGGGTCCCTAACTGGTGGAAAACCAAG CCAAGCTGAACCGTGCTGCTCTTACATTTAAGCAGAAGAGAGCCGTGGCTCACTGAGCAA TGCTTCCTTCCCCAGAAGGAAATTCATAATTGGTCCCATCGACCCTCTTGCCTGTTGGCT TTGCCAGTAGCAGGACCAGGTGGG |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 563-680, - strand, RNAz p=0.997233 | |
| 620-798, - strand, RNAz p=0.99188 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 563-680, - strand, RNAz p=0.997233 | |
| 620-798, - strand, RNAz p=0.99188 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 61-247, gnl|bosTau2|chr19 (53773528-53773717) | |
| 61-247, gnl|canFam2|chr9 (11458661-11458916) | |
| 61-247, gnl|hg17|chr17 (67758949-67759208) | |
| 61-247, gnl|Hg17|chr17 (67759200-67759027) | |
| 61-247, gnl|mm7|chr11 (113013445-113013709) | |
| 61-247, gnl|Mm7|chr11 (113013700-113013520) | |
| 61-247, gnl|oryCun1|scaffold_211951 (80574-80324) | |
| 61-247, gnl|panTro1|chr19 (71099386-71099645) | |
| 61-247, gnl|rheMac2|chr16 (67488556-67488809) | |
| 61-247, gnl|rn3|chr10 (102534508-102534787) | |
| 319-518, gnl|bosTau2|chr19 (53774038-53774237) | |
| 319-518, gnl|Hg17|chr17 (67758909-67758724) | |
| 319-518, gnl|Mm7|chr11 (113013392-113013220) | |
| 554-799, gnl|bosTau2|chr19 (53774239-53774480) | |
| 554-799, gnl|canFam2|chr9 (11458117-11458464) | |
| 554-799, gnl|dasNov1|scaffold_5007 (18818-18515) | |
| 554-799, gnl|echTel1|scaffold_300326 (21697-21389) | |
| 554-799, gnl|hg17|chr17 (67758466-67758767) | |
| 554-799, gnl|Hg17|chr17 (67758722-67758465) | |
| 554-799, gnl|loxAfr1|scaffold_49901 (757-1062) | |
| 554-799, gnl|mm7|chr11 (113012957-113013260) | |
| 554-799, gnl|Mm7|chr11 (113013184-113012939) | |
| 554-799, gnl|monDom2|scaffold_18 (28135263-28135528) | |
| 554-799, gnl|panTro1|chr19 (71098905-71099206) | |
| 554-799, gnl|rheMac2|chr16 (67488073-67488374) | |
| 554-799, gnl|rn3|chr10 (102534021-102534327) | |
| 818-1104, gnl|bosTau2|chr19 (53774948-53775220) | |
| 818-1104, gnl|canFam2|chr9 (11457767-11458079) | |
| 818-1104, gnl|dasNov1|scaffold_5007 (19167-18856) | |
| 818-1104, gnl|echTel1|scaffold_300326 (22062-21734) | |
| 818-1104, gnl|hg17|chr17 (67758115-67758444) | |
| 818-1104, gnl|Hg17|chr17 (67758443-67758154) | |
| 818-1104, gnl|loxAfr1|scaffold_49901 (393-719) | |
| 818-1104, gnl|mm7|chr11 (113012566-113012907) | |
| 818-1104, gnl|oryCun1|scaffold_211951 (81888-81569) | |
| 818-1104, gnl|panTro1|chr19 (71098554-71098883) | |
| 818-1104, gnl|rheMac2|chr16 (67487723-67488051) | |
| 818-1104, gnl|rn3|chr10 (102533649-102533978) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 61-247, gnl|bosTau2|chr19 (53773528-53773717) | |
| 61-247, gnl|canFam2|chr9 (11458661-11458916) | |
| 61-247, gnl|hg17|chr17 (67758949-67759208) | |
| 61-247, gnl|Hg17|chr17 (67759200-67759027) | |
| 61-247, gnl|mm7|chr11 (113013445-113013709) | |
| 61-247, gnl|Mm7|chr11 (113013700-113013520) | |
| 61-247, gnl|oryCun1|scaffold_211951 (80574-80324) | |
| 61-247, gnl|panTro1|chr19 (71099386-71099645) | |
| 61-247, gnl|rheMac2|chr16 (67488556-67488809) | |
| 61-247, gnl|rn3|chr10 (102534508-102534787) | |
| 319-518, gnl|bosTau2|chr19 (53774038-53774237) | |
| 319-518, gnl|Hg17|chr17 (67758909-67758724) | |
| 319-518, gnl|Mm7|chr11 (113013392-113013220) | |
| 554-799, gnl|bosTau2|chr19 (53774239-53774480) | |
| 554-799, gnl|canFam2|chr9 (11458117-11458464) | |
| 554-799, gnl|dasNov1|scaffold_5007 (18818-18515) | |
| 554-799, gnl|echTel1|scaffold_300326 (21697-21389) | |
| 554-799, gnl|hg17|chr17 (67758466-67758767) | |
| 554-799, gnl|Hg17|chr17 (67758722-67758465) | |
| 554-799, gnl|loxAfr1|scaffold_49901 (757-1062) | |
| 554-799, gnl|mm7|chr11 (113012957-113013260) | |
| 554-799, gnl|Mm7|chr11 (113013184-113012939) | |
| 554-799, gnl|monDom2|scaffold_18 (28135263-28135528) | |
| 554-799, gnl|panTro1|chr19 (71098905-71099206) | |
| 554-799, gnl|rheMac2|chr16 (67488073-67488374) | |
| 554-799, gnl|rn3|chr10 (102534021-102534327) | |
| 818-1104, gnl|bosTau2|chr19 (53774948-53775220) | |
| 818-1104, gnl|canFam2|chr9 (11457767-11458079) | |
| 818-1104, gnl|dasNov1|scaffold_5007 (19167-18856) | |
| 818-1104, gnl|echTel1|scaffold_300326 (22062-21734) | |
| 818-1104, gnl|hg17|chr17 (67758115-67758444) | |
| 818-1104, gnl|Hg17|chr17 (67758443-67758154) | |
| 818-1104, gnl|loxAfr1|scaffold_49901 (393-719) | |
| 818-1104, gnl|mm7|chr11 (113012566-113012907) | |
| 818-1104, gnl|oryCun1|scaffold_211951 (81888-81569) | |
| 818-1104, gnl|panTro1|chr19 (71098554-71098883) | |
| 818-1104, gnl|rheMac2|chr16 (67487723-67488051) | |
| 818-1104, gnl|rn3|chr10 (102533649-102533978) |