Ss1.1-Pig3-SRG8014D10.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAAAACATCCCTGATAAGTGGACCCCGGAAGTGAAGCACTTCTGCCCCAATGTGCCCAT CATCCTAGTGGGAAATAAGAAGGACCTGAGGCAAGATGAGCACACACGGAGGGAGCTGGC CAAGATGAAGCAGGAGCCTGTTCGATCTGAGGAGAGCCAAGACCAATGAGGGGGTGCGGG AGGTGTTTGAGATGGCCACTCGGGCTGGCCTCCATGTCCGCAAGAATAAGCGCCGGAGAG GCTGCCCCATTCTCTGAGCTCCCCTCGGCTTCCCCTGCCTCCCTGCCTCCCTTCACAGGG CACAGAAGCTCCCCTCCCTACTATGGATCCCTGCCCAAGGCTCCCTTTCCCAGTTCCCTC CTGCCCAGGACTGCATCGTTCCCCAGCTCTGAGGGTGGTGGCCAGCGGCCCTGGGAACAT AGGGCTGTGTCCTGCCTGTCCAGAGCCGTCCCTACTCCTGTTGCCTTGGTCCAGGGGTGG AGCCTTTGCTCCTTTAGGCCTTCCCCCCAGGATCATCACACCAGCACTTTATACACGTCT GGCTCACAGGATAGAAGCTGGGGTAGGGGACCTGGAGGGTGTAACCCGGAGTCCTGGTCC CTGGTGTTTCTGCTTTGGGCAGAGGCCTTGGCTCTGGCTATACTTGGTGGGGGGCATGAA TAAAGCCCACAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAAAACATCCCTGATAAGTGGACCCCGGAAGTGAAGCACTTCTGCCCCAATGTGCCCAT CATCCTAGTGGGAAATAAGAAGGACCTGAGGCAAGATGAGCACACACGGAGGGAGCTGGC CAAGATGAAGCAGGAGCCTGTTCGATCTGAGGAGAGCCAAGACCAATGAGGGGGTGCGGG AGGTGTTTGAGATGGCCACTCGGGCTGGCCTCCATGTCCGCAAGAATAAGCGCCGGAGAG GCTGCCCCATTCTCTGAGCTCCCCTCGGCTTCCCCTGCCTCCCTGCCTCCCTTCACAGGG CACAGAAGCTCCCCTCCCTACTATGGATCCCTGCCCAAGGCTCCCTTTCCCAGTTCCCTC CTGCCCAGGACTGCATCGTTCCCCAGCTCTGAGGGTGGTGGCCAGCGGCCCTGGGAACAT AGGGCTGTGTCCTGCCTGTCCAGAGCCGTCCCTACTCCTGTTGCCTTGGTCCAGGGGTGG AGCCTTTGCTCCTTTAGGCCTTCCCCCCAGGATCATCACACCAGCACTTTATACACGTCT GGCTCACAGGATAGAAGCTGGGGTAGGGGACCTGGAGGGTGTAACCCGGAGTCCTGGTCC CTGGTGTTTCTGCTTTGGGCAGAGGCCTTGGCTCTGGCTATACTTGGTGGGGGGCATGAA TAAAGCCCACAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 16-134, + strand, RNAz p=0.659417 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 16-134, + strand, RNAz p=0.659417 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 2-134, gnl|bosTau2|chr3 (27408226-27408094) | |
| 2-134, gnl|canFam2|chr17 (65948972-65948826) | |
| 2-134, gnl|danRer3|chr6 (30345143-30344997) | |
| 2-134, gnl|dasNov1|scaffold_12381 (5911-5778) | |
| 2-134, gnl|echTel1|scaffold_310965 (88077-88223) | |
| 2-134, gnl|fr1|chrUn (131279523-131279376) | |
| 2-134, gnl|galGal2|chr12 (2525321-2525467) | |
| 2-134, gnl|hg17|chr1 (112957227-112957373) | |
| 2-134, gnl|Hg17|chr1 (112957358-112957226) | |
| 2-134, gnl|loxAfr1|scaffold_25415 (20763-20891) | |
| 2-134, gnl|mm7|chr3 (104586011-104585867) | |
| 2-134, gnl|Mm7|chr3 (104585878-104586010) | |
| 2-134, gnl|monDom2|scaffold_0 (2569105-2568959) | |
| 2-134, gnl|oryCun1|scaffold_177207 (102957-103088) | |
| 2-134, gnl|panTro1|chr1 (109301763-109301617) | |
| 2-134, gnl|rheMac2|chr13 (20374265-20374135) | |
| 2-134, gnl|rn3|chr2 (200015299-200015155) | |
| 2-134, gnl|tetNig1|chr11 (7574354-7574489) | |
| 2-134, gnl|xenTro1|scaffold_11 (2872931-2872797) | |
| 155-403, gnl|bosTau2|chr3 (27407017-27406761) | |
| 155-403, gnl|Hg17|chr1 (112956306-112956050) | |
| 155-403, gnl|Mm7|chr3 (104586920-104587177) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-134, gnl|bosTau2|chr3 (27408226-27408094) | |
| 2-134, gnl|canFam2|chr17 (65948972-65948826) | |
| 2-134, gnl|danRer3|chr6 (30345143-30344997) | |
| 2-134, gnl|dasNov1|scaffold_12381 (5911-5778) | |
| 2-134, gnl|echTel1|scaffold_310965 (88077-88223) | |
| 2-134, gnl|fr1|chrUn (131279523-131279376) | |
| 2-134, gnl|galGal2|chr12 (2525321-2525467) | |
| 2-134, gnl|hg17|chr1 (112957227-112957373) | |
| 2-134, gnl|Hg17|chr1 (112957358-112957226) | |
| 2-134, gnl|loxAfr1|scaffold_25415 (20763-20891) | |
| 2-134, gnl|mm7|chr3 (104586011-104585867) | |
| 2-134, gnl|Mm7|chr3 (104585878-104586010) | |
| 2-134, gnl|monDom2|scaffold_0 (2569105-2568959) | |
| 2-134, gnl|oryCun1|scaffold_177207 (102957-103088) | |
| 2-134, gnl|panTro1|chr1 (109301763-109301617) | |
| 2-134, gnl|rheMac2|chr13 (20374265-20374135) | |
| 2-134, gnl|rn3|chr2 (200015299-200015155) | |
| 2-134, gnl|tetNig1|chr11 (7574354-7574489) | |
| 2-134, gnl|xenTro1|scaffold_11 (2872931-2872797) | |
| 155-403, gnl|bosTau2|chr3 (27407017-27406761) | |
| 155-403, gnl|Hg17|chr1 (112956306-112956050) | |
| 155-403, gnl|Mm7|chr3 (104586920-104587177) |