Ss1.1-Pig3-SRG8016K24.3
|
CAAACAAATGAAATGCTCTCTGCATAACTGCGAAGACGCTCAAGGAGAAATGTGTCTTCC
CCTTGTCTCACTGTACATAATAGCTGCTTCTGTGGTTTCATATCAAGGGCACCAGTACTT
ATGGGGCTTCAGTAATGTACAGAGCCTTATGCAATGCATTGGATGAATCTGCTGCCCCGT
GGCTTCCATGGCTCCTTGGGCCTGGGGGTAAGGGGTGCTGCTAACTTACCTAAATGTTCT
GGTCTCTTTGAGAGCTCAAGCCTTCTGGAAGGCCATGTTTGAGCTCTTCCTCTTANATGG
CTTTGATGTGGTCCTGCCTGGCACTCATGGAGTTCCCTCCTGATCTGGTGGAAAGTCTTA
TGATGGACATGGAACACTAATGACCAAATCAGTCAGGTCTCATTTCTACTCAAGGGGTGC
CTGACTCATCTCCCTGTGCTTTGTGCTCCCAAGAACCACCACTGGAAAGCTTTTCCTCAT
TCACACAGATATTGGAGGAGTATTTTCTCATGCTTCACAGTCATTCATTTTTTGGGTCAT
AAAGTATTCTTTTCTGGATGCAGTCTGACCAAGAAAATGAGAAGTGAAGAGTCATTCATC
CTGTAAATATGTACTGAGACTTCCTGGGAACCTCCAGATGCCATGGGAGTGGCCCTAGAA
AAGAAAAAAAAAAAAAAAAGAAGGACACAGGTTCGATCCCCCCCTTCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAAACAAATGAAATGCTCTCTGCATAACTGCGAAGACGCTCAAGGAGAAATGTGTCTTCC
CCTTGTCTCACTGTACATAATAGCTGCTTCTGTGGTTTCATATCAAGGGCACCAGTACTT
ATGGGGCTTCAGTAATGTACAGAGCCTTATGCAATGCATTGGATGAATCTGCTGCCCCGT
GGCTTCCATGGCTCCTTGGGCCTGGGGGTAAGGGGTGCTGCTAACTTACCTAAATGTTCT
GGTCTCTTTGAGAGCTCAAGCCTTCTGGAAGGCCATGTTTGAGCTCTTCCTCTTANATGG
CTTTGATGTGGTCCTGCCTGGCACTCATGGAGTTCCCTCCTGATCTGGTGGAAAGTCTTA
TGATGGACATGGAACACTAATGACCAAATCAGTCAGGTCTCATTTCTACTCAAGGGGTGC
CTGACTCATCTCCCTGTGCTTTGTGCTCCCAAGAACCACCACTGGAAAGCTTTTCCTCAT
TCACACAGATATTGGAGGAGTATTTTCTCATGCTTCACAGTCATTCATTTTTTGGGTCAT
AAAGTATTCTTTTCTGGATGCAGTCTGACCAAGAAAATGAGAAGTGAAGAGTCATTCATC
CTGTAAATATGTACTGAGACTTCCTGGGAACCTCCAGATGCCATGGGAGTGGCCCTAGAA
AAGAAAAAAAAAAAAAAAAGAAGGACACAGGTTCGATCCCCCCCTTCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
278-626, gnl|bosTau2|chr19 (43658806-43659151) |
|
278-626, gnl|canFam2|chr9 (16035743-16035455) |
|
278-626, gnl|dasNov1|scaffold_38473 (4030-3712) |
|
278-626, gnl|echTel1|scaffold_285906 (71740-72043) |
|
278-626, gnl|hg17|chr17 (63060441-63060760) |
|
278-626, gnl|Hg17|chr17 (63060469-63060843) |
|
278-626, gnl|oryCun1|scaffold_205751 (78457-78771) |
|
278-626, gnl|panTro1|chr19 (66336412-66336733) |
|
278-626, gnl|rheMac2|chr16 (62976264-62976583) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
278-626, gnl|bosTau2|chr19 (43658806-43659151) |
|
278-626, gnl|canFam2|chr9 (16035743-16035455) |
|
278-626, gnl|dasNov1|scaffold_38473 (4030-3712) |
|
278-626, gnl|echTel1|scaffold_285906 (71740-72043) |
|
278-626, gnl|hg17|chr17 (63060441-63060760) |
|
278-626, gnl|Hg17|chr17 (63060469-63060843) |
|
278-626, gnl|oryCun1|scaffold_205751 (78457-78771) |
|
278-626, gnl|panTro1|chr19 (66336412-66336733) |
|
278-626, gnl|rheMac2|chr16 (62976264-62976583) |
