Non-Coding RNA Search

Ss1.1-Pig3-SRG8017F19.5

Sequence:


               
               GCCGCCGAGGGAGCGAGCTAGGAGCTGGGTTGGCTCAAGTGGGAACCTGGTGAGGGCTAT
ATCTGTCCTTTTAAGCAGATGAGCTCTAAGGGCTTGACAGTGTGTCAGTTTATGGGGAAC
AAGTTGAGATCTGGGTGTATGGTGCACGCTGCTCGTTGGTGTTGGGTGGGGGCAGCCGGG
CACGTGCGCATACTGAGGAGTGTGTAGGTGTCACCCCTTTCAGTCTTTTAGGCTTTTTTT
AGGGCGTCTAGGCAAGTGTCATCCAATTTGACATTCCTTCTTGAGGTTGCTGATAAAAAC
TACTACTTCCGTAATCACCGAGGATGGAAGCCCCCTACAGTTGAGGAGTGAAAGATCCTA
AGAAAACACTCACTATTTTAGTTAACAGCCAGCTGTGCCTGAGTTCTTTGATCCAAACAC
TGTCTGTAGTTTTACGTTCATATAGTTGCTGGAAGGAATGGAAGAAAAAAATAGGAATTT
GACCTTCCTAACGTCACAAGTAACCAGCTTACTTTTCCAATCAGTGACTTTCATGACTTC
CTTTTCCCAAAGAAATTTTCATCGTGGTTTACTAGTGCCAGCTTTTTATTATATATTTTT
AAAGTAACAGCTTTATTGAGATATAATTCACATACTGAAAAGCTCAGCCTTTTGAAGTGT
ACAGTTCCATGATTTTTGGTATAC------------------------------------
CACCCCCAAAAGAAGCCCCCTTAGCAGTTACTCTCTACTCTCCTTCCCTTGGCCCCTTTT
AACCACTAATTTTTCTGTCTGTGTAAATTTGCCTAGTCTGGATATTTCACATAAACATAA
TTATACGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGCCGAGGGAGCGAGCTAGGAGCTGGGTTGGCTCAAGTGGGAACCTGGTGAGGGCTAT
ATCTGTCCTTTTAAGCAGATGAGCTCTAAGGGCTTGACAGTGTGTCAGTTTATGGGGAAC
AAGTTGAGATCTGGGTGTATGGTGCACGCTGCTCGTTGGTGTTGGGTGGGGGCAGCCGGG
CACGTGCGCATACTGAGGAGTGTGTAGGTGTCACCCCTTTCAGTCTTTTAGGCTTTTTTT
AGGGCGTCTAGGCAAGTGTCATCCAATTTGACATTCCTTCTTGAGGTTGCTGATAAAAAC
TACTACTTCCGTAATCACCGAGGATGGAAGCCCCCTACAGTTGAGGAGTGAAAGATCCTA
AGAAAACACTCACTATTTTAGTTAACAGCCAGCTGTGCCTGAGTTCTTTGATCCAAACAC
TGTCTGTAGTTTTACGTTCATATAGTTGCTGGAAGGAATGGAAGAAAAAAATAGGAATTT
GACCTTCCTAACGTCACAAGTAACCAGCTTACTTTTCCAATCAGTGACTTTCATGACTTC
CTTTTCCCAAAGAAATTTTCATCGTGGTTTACTAGTGCCAGCTTTTTATTATATATTTTT
AAAGTAACAGCTTTATTGAGATATAATTCACATACTGAAAAGCTCAGCCTTTTGAAGTGT
ACAGTTCCATGATTTTTGGTATAC------------------------------------
CACCCCCAAAAGAAGCCCCCTTAGCAGTTACTCTCTACTCTCCTTCCCTTGGCCCCTTTT
AACCACTAATTTTTCTGTCTGTGTAAATTTGCCTAGTCTGGATATTTCACATAAACATAA
TTATACGAAAAA

Aligned organism(s): 7 entry(ies)

More info

Aligned organism(s): 7 entry(ies)

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               21-380, gnl|bosTau2|chr10 (25904189-25903829)
               

               
               21-380, gnl|Hg17|chr15 (39195094-39194664)
               

               
               21-380, gnl|Mm7|chr2 (119217864-119217498)
               


               
               457-684, gnl|bosTau2|chr10 (25903829-25903602)
               

               
               457-684, gnl|Hg17|chr15 (39194664-39194458)
               


               
               685-810, gnl|bosTau2|chr10 (25903560-25903432)
               

               
               685-810, gnl|Hg17|chr15 (39194418-39194305)

Aligned organism(s): 7 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-380, gnl|bosTau2|chr10 (25904189-25903829)
               

               
               21-380, gnl|Hg17|chr15 (39195094-39194664)
               

               
               21-380, gnl|Mm7|chr2 (119217864-119217498)
               


               
               457-684, gnl|bosTau2|chr10 (25903829-25903602)
               

               
               457-684, gnl|Hg17|chr15 (39194664-39194458)
               


               
               685-810, gnl|bosTau2|chr10 (25903560-25903432)
               

               
               685-810, gnl|Hg17|chr15 (39194418-39194305)

	21-380, gnl\|bosTau2\|chr10 (25904189-25903829)
	21-380, gnl\|Hg17\|chr15 (39195094-39194664)
	21-380, gnl\|Mm7\|chr2 (119217864-119217498)

	457-684, gnl\|bosTau2\|chr10 (25903829-25903602)
	457-684, gnl\|Hg17\|chr15 (39194664-39194458)

	685-810, gnl\|bosTau2\|chr10 (25903560-25903432)
	685-810, gnl\|Hg17\|chr15 (39194418-39194305)