Ss1.1-Pig3-SRG8017L21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCGATCTAGAACTAGTTGAGAATCTGGGAGGTTTCAGGCGAGTTAGGGCTGCCTGGAGC GGAGTGGAGCTGTGGCCTCGAGACGGGGAGTTGAAGGGGGAAGCTTGGGCTCCGAATCGG CGCAGGCGGCTCTCACGCGTTCCTTCCTGCCTTTGTGCCCGCTGCCATGTGGGCTACCCT GAGGTTGGCCCTGAGGCCGTGCGCCCGCGTCCCTGTCTCCACGCTGCGCGCCTATCATGG GGCTTCCGTGGTCGCACTGGGCACTCAACCAGACTCTAGCTCTGCCATCTACCAGGAAAA CTACAAACAGATGAAAGCACTAGTTGATCAACTCTATGAGCGAGCACAGAAAATAAGACT AGGAGGTGATGAGAAAGCCCGCGCACGTCACGTTTCAAGAGGAAAACTGTTAGCCAGAGA AAGAGTGGACAGTCTTATCGACCCAGGGTCTCCATTCTTGGAATTATCCCAGTTTGCAGG TTACCAGTTGTATGGAGATGAGGAGGTCCCCGCAGGTGGCATCATTACAGGCATTGGGAG AGTGTCGGGAGTAGAATGCATGATTGTTGCCAATGATGCCACCATCAAAGGAGGCACCTA CTACCCAGTGACCGTGAAAAAACAATTACGGGCACAGGAAATCGCGATGCAGAACAGGCT TCCCTGCATTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCGATCTAGAACTAGTTGAGAATCTGGGAGGTTTCAGGCGAGTTAGGGCTGCCTGGAGC GGAGTGGAGCTGTGGCCTCGAGACGGGGAGTTGAAGGGGGAAGCTTGGGCTCCGAATCGG CGCAGGCGGCTCTCACGCGTTCCTTCCTGCCTTTGTGCCCGCTGCCATGTGGGCTACCCT GAGGTTGGCCCTGAGGCCGTGCGCCCGCGTCCCTGTCTCCACGCTGCGCGCCTATCATGG GGCTTCCGTGGTCGCACTGGGCACTCAACCAGACTCTAGCTCTGCCATCTACCAGGAAAA CTACAAACAGATGAAAGCACTAGTTGATCAACTCTATGAGCGAGCACAGAAAATAAGACT AGGAGGTGATGAGAAAGCCCGCGCACGTCACGTTTCAAGAGGAAAACTGTTAGCCAGAGA AAGAGTGGACAGTCTTATCGACCCAGGGTCTCCATTCTTGGAATTATCCCAGTTTGCAGG TTACCAGTTGTATGGAGATGAGGAGGTCCCCGCAGGTGGCATCATTACAGGCATTGGGAG AGTGTCGGGAGTAGAATGCATGATTGTTGCCAATGATGCCACCATCAAAGGAGGCACCTA CTACCCAGTGACCGTGAAAAAACAATTACGGGCACAGGAAATCGCGATGCAGAACAGGCT TCCCTGCATTTA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 555-672, - strand, RNAz p=0.526681 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 555-672, - strand, RNAz p=0.526681 |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 19-296, gnl|bosTau2|chr20 (4775090-4775367) | |
| 19-296, gnl|canFam2|chr2 (57624627-57624890) | |
| 19-296, gnl|dasNov1|scaffold_21816 (6518-6256) | |
| 19-296, gnl|echTel1|scaffold_267860 (6153-6409) | |
| 19-296, gnl|hg17|chr5 (70918823-70919059) | |
| 19-296, gnl|Hg17|chr5 (70918879-70919138) | |
| 19-296, gnl|loxAfr1|scaffold_31874 (12768-12525) | |
| 19-296, gnl|mm7|chr13 (97088374-97088150) | |
| 19-296, gnl|Mm7|chr13 (97088312-97088069) | |
| 19-296, gnl|oryCun1|scaffold_109015 (3795-4031) | |
| 19-296, gnl|panTro1|chr4 (44540873-44540637) | |
| 19-296, gnl|rheMac2|chr6 (67744996-67745236) | |
| 19-296, gnl|rn3|chr2 (30953307-30953066) | |
| 549-672, gnl|bosTau2|chr20 (4797594-4797717) | |
| 549-672, gnl|canFam2|chr2 (57649396-57649545) | |
| 549-672, gnl|danRer3|chr5 (48012545-48012396) | |
| 549-672, gnl|echTel1|scaffold_260710 (2080-2229) | |
| 549-672, gnl|fr1|chrUn (175452403-175452569) | |
| 549-672, gnl|galGal2|chrZ_random (6659113-6659258) | |
| 549-672, gnl|hg17|chr5 (70934087-70934236) | |
| 549-672, gnl|Hg17|chr5 (70934088-70934211) | |
| 549-672, gnl|loxAfr1|scaffold_33816 (61317-61466) | |
| 549-672, gnl|mm7|chr13 (97061095-97060949) | |
| 549-672, gnl|Mm7|chr13 (97061092-97060969) | |
| 549-672, gnl|monDom2|scaffold_60 (4326287-4326434) | |
| 549-672, gnl|oryCun1|scaffold_176179 (46945-47094) | |
| 549-672, gnl|panTro1|chr4 (44525639-44525490) | |
| 549-672, gnl|rheMac2|chr6 (67761763-67761912) | |
| 549-672, gnl|rn3|chr2 (30925480-30925334) | |
| 549-672, gnl|tetNig1|chr12 (5603973-5603838) | |
| 549-672, gnl|xenTro1|scaffold_120 (518874-519024) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 19-296, gnl|bosTau2|chr20 (4775090-4775367) | |
| 19-296, gnl|canFam2|chr2 (57624627-57624890) | |
| 19-296, gnl|dasNov1|scaffold_21816 (6518-6256) | |
| 19-296, gnl|echTel1|scaffold_267860 (6153-6409) | |
| 19-296, gnl|hg17|chr5 (70918823-70919059) | |
| 19-296, gnl|Hg17|chr5 (70918879-70919138) | |
| 19-296, gnl|loxAfr1|scaffold_31874 (12768-12525) | |
| 19-296, gnl|mm7|chr13 (97088374-97088150) | |
| 19-296, gnl|Mm7|chr13 (97088312-97088069) | |
| 19-296, gnl|oryCun1|scaffold_109015 (3795-4031) | |
| 19-296, gnl|panTro1|chr4 (44540873-44540637) | |
| 19-296, gnl|rheMac2|chr6 (67744996-67745236) | |
| 19-296, gnl|rn3|chr2 (30953307-30953066) | |
| 549-672, gnl|bosTau2|chr20 (4797594-4797717) | |
| 549-672, gnl|canFam2|chr2 (57649396-57649545) | |
| 549-672, gnl|danRer3|chr5 (48012545-48012396) | |
| 549-672, gnl|echTel1|scaffold_260710 (2080-2229) | |
| 549-672, gnl|fr1|chrUn (175452403-175452569) | |
| 549-672, gnl|galGal2|chrZ_random (6659113-6659258) | |
| 549-672, gnl|hg17|chr5 (70934087-70934236) | |
| 549-672, gnl|Hg17|chr5 (70934088-70934211) | |
| 549-672, gnl|loxAfr1|scaffold_33816 (61317-61466) | |
| 549-672, gnl|mm7|chr13 (97061095-97060949) | |
| 549-672, gnl|Mm7|chr13 (97061092-97060969) | |
| 549-672, gnl|monDom2|scaffold_60 (4326287-4326434) | |
| 549-672, gnl|oryCun1|scaffold_176179 (46945-47094) | |
| 549-672, gnl|panTro1|chr4 (44525639-44525490) | |
| 549-672, gnl|rheMac2|chr6 (67761763-67761912) | |
| 549-672, gnl|rn3|chr2 (30925480-30925334) | |
| 549-672, gnl|tetNig1|chr12 (5603973-5603838) | |
| 549-672, gnl|xenTro1|scaffold_120 (518874-519024) |