Ss1.1-Pig3-SRG8018J13.5
|
GATTGGAGTGAGGGGTTTATGGCTTAATATTTTCTCTGGGTAAAAAGCTATCTTACTTCT
CCTTAGCAATATGATGCAGACTTAGATCTTCATGTAACAGATGAACTGCCATAAGTTCTC
ATTTAACTGTTAAATTCATTCATTCTTTCAAGATGGGACACTTAGGAGTTCCTATTGGGG
CTCAGCAGTTAA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------AGACAAAAAAAAAAAAAAATGGGA
CACTTAGTTAGCTAAATGTAGTTCATGACCAGAGAGAACTCAGCTAAGACTGGTTCTGGT
TCTTAAAGTGTGGTCCCCAGACCAGCTACATCAGCATCACTTGGGAACTTGTTAGAAATG
CAAATTCTCTGTTCCCATCCCAGATCCACTGAACCAAATATGAGTAGTAGGGCCCATCCA
GCTGTATTTCAACAAGCCCTTCACATTAATGTTCATAATTCAGTTGTTCAGTGGAAAGCA
TAACAAAGTAACTGAATTCCTACAGCCATGAAAGTAATAAAGCAAAGCATTTAAACATAA
CTCAGTTTAACTGAATCTCAGAAAGATGAAAAAGCAGAGACCTTTACATTTTTCCTACTA
TCTTAAGTATTTCTTTCTCGATTCTTGGAAAATCAACCTCCTCCTTAGTTTCATATTATC
AGCTTGTTTCCAATTTTTTTCCTTTCCTTTGGGTTTTTTAATTTTAATTTTTATTTTTTG
GCCTCTCCTAGAGCATGTGGAAGTTCCCAGGCCAGGGATCAAATCTATGCCATGACAGAG
CCACAACAGTGACAACACTAGATCCTTGGCCCAATGCACCACAAAAGAACTCCCATTTGA
GAGTTTTTCAAAATATAATTAATTTGCATTTATTAGGAGACTATCCCAGTTACTCTTTAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GATTGGAGTGAGGGGTTTATGGCTTAATATTTTCTCTGGGTAAAAAGCTATCTTACTTCT
CCTTAGCAATATGATGCAGACTTAGATCTTCATGTAACAGATGAACTGCCATAAGTTCTC
ATTTAACTGTTAAATTCATTCATTCTTTCAAGATGGGACACTTAGGAGTTCCTATTGGGG
CTCAGCAGTTAA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------AGACAAAAAAAAAAAAAAATGGGA
CACTTAGTTAGCTAAATGTAGTTCATGACCAGAGAGAACTCAGCTAAGACTGGTTCTGGT
TCTTAAAGTGTGGTCCCCAGACCAGCTACATCAGCATCACTTGGGAACTTGTTAGAAATG
CAAATTCTCTGTTCCCATCCCAGATCCACTGAACCAAATATGAGTAGTAGGGCCCATCCA
GCTGTATTTCAACAAGCCCTTCACATTAATGTTCATAATTCAGTTGTTCAGTGGAAAGCA
TAACAAAGTAACTGAATTCCTACAGCCATGAAAGTAATAAAGCAAAGCATTTAAACATAA
CTCAGTTTAACTGAATCTCAGAAAGATGAAAAAGCAGAGACCTTTACATTTTTCCTACTA
TCTTAAGTATTTCTTTCTCGATTCTTGGAAAATCAACCTCCTCCTTAGTTTCATATTATC
AGCTTGTTTCCAATTTTTTTCCTTTCCTTTGGGTTTTTTAATTTTAATTTTTATTTTTTG
GCCTCTCCTAGAGCATGTGGAAGTTCCCAGGCCAGGGATCAAATCTATGCCATGACAGAG
CCACAACAGTGACAACACTAGATCCTTGGCCCAATGCACCACAAAAGAACTCCCATTTGA
GAGTTTTTCAAAATATAATTAATTTGCATTTATTAGGAGACTATCCCAGTTACTCTTTAA |
|
1-165, gnl|bosTau2|chr20 (21547275-21547103) |
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1-165, gnl|canFam2|chr4 (72799823-72799632) |
|
1-165, gnl|dasNov1|scaffold_61197 (11165-10980) |
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1-165, gnl|hg17|chr5 (39456012-39456207) |
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1-165, gnl|Hg17|chr5 (39456227-39456045) |
|
1-165, gnl|loxAfr1|scaffold_8820 (29534-29341) |
|
1-165, gnl|mm7|chr15 (6218726-6218521) |
|
1-165, gnl|Mm7|chr15 (6218507-6218694) |
|
1-165, gnl|oryCun1|scaffold_201173 (297051-297235) |
|
1-165, gnl|panTro1|chr4 (77268032-77267837) |
|
1-165, gnl|rheMac2|chr6 (39239054-39239250) |
|
1-165, gnl|rn3|chr2 (55617362-55617162) |
| |
|
214-677, gnl|bosTau2|chr20 (21547112-21546646) |
|
214-677, gnl|Hg17|chr5 (39456054-39455596) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-165, gnl|bosTau2|chr20 (21547275-21547103) |
|
1-165, gnl|canFam2|chr4 (72799823-72799632) |
|
1-165, gnl|dasNov1|scaffold_61197 (11165-10980) |
|
1-165, gnl|hg17|chr5 (39456012-39456207) |
|
1-165, gnl|Hg17|chr5 (39456227-39456045) |
|
1-165, gnl|loxAfr1|scaffold_8820 (29534-29341) |
|
1-165, gnl|mm7|chr15 (6218726-6218521) |
|
1-165, gnl|Mm7|chr15 (6218507-6218694) |
|
1-165, gnl|oryCun1|scaffold_201173 (297051-297235) |
|
1-165, gnl|panTro1|chr4 (77268032-77267837) |
|
1-165, gnl|rheMac2|chr6 (39239054-39239250) |
|
1-165, gnl|rn3|chr2 (55617362-55617162) |
| |
|
214-677, gnl|bosTau2|chr20 (21547112-21546646) |
|
214-677, gnl|Hg17|chr5 (39456054-39455596) |
