Non-Coding RNA Search

Ss1.1-Pig3-SRG8018P01.5

Sequence:


               
               AACTAGGAAGTATTCGAGCAGCAGCCTAAGTCACATGGGCGCCTACAGCCGATCTCTGCC
CAGGCTGCACAGGGCCACAGAGAGCCAGCTGGCGCCTCTTAGTTTGCCTCCAAGAAGCTC
TCTGGGCAACTCCAAACGAACGAAACTGGGGGAAAAGGATCTACCTCATAGCATCATAGA
CAATGACAATTACCTGAATTTTTCTTCTCTGAGCTCAGGAGCTTCACCTTATAAAACCTC
TGCCTCTGAGGGCAATCCTTATGTGAGTTCCACCCTCAGCATCCCTGCCAGTCCTCGAGT
GGCTCGGAAGATGCTTTTGGCCTCGACCTCTTCCTGTACCTCTGATGACCTTGATAGGGC
TTCCTACTCTGGGACTAGCCCAGGTCATTCATTTCCTCCCGGAGAGCTGGACAGAGTGTT
TACAGCCAGGAGGAACTTCTCATGTGGGTCTGTCGAGTTTGATGATGCAGATCTGGACAG
CCTCAGACAGGCCTCGGGAACCCCCCAGCCTGTCCTTCGGGAACGGAAAAGCAGCATCAG
CTCCATTTCGGGACGAGATGACCTGATGGATTATCAAGCTGTCCCCTTCCACCCACTCAC
TGCTCTTGCCTCCTCTATGTTCCAGGAGAGACAGCGCCTGGAGACTATCCTCAGTCTCTG
TGCTGAATACACAAAGCCTGACAGTCGCTTGTCCACTGGCACCACTGTAGCAGATGTGCA
GAAAATCAATAAGGAGCTGGAGAAGCTGCAGATCTCTGACGAGGAGTCCGTGTTTGAAGA
ACCCCTGGTGAGCCCTGAAGCCAGGTACAGATGCCACCAGAAAAGCTCTCTCCACGATGC
AGACCTGGCAGGCTTCGGGAGCCTCAGTCAGAGCAGCGCCAGCTTCCTTCCCCCCAGGAG
CGCCAGGAACGAGGAGCTGCTCAGGGACCTCACCAGGACTCCCCACCGCCCTCTTCTGCC
TTTGTGAAAGCTTCGGGCGAGTCCACTTATTTTAGTATCCTACCAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACTAGGAAGTATTCGAGCAGCAGCCTAAGTCACATGGGCGCCTACAGCCGATCTCTGCC
CAGGCTGCACAGGGCCACAGAGAGCCAGCTGGCGCCTCTTAGTTTGCCTCCAAGAAGCTC
TCTGGGCAACTCCAAACGAACGAAACTGGGGGAAAAGGATCTACCTCATAGCATCATAGA
CAATGACAATTACCTGAATTTTTCTTCTCTGAGCTCAGGAGCTTCACCTTATAAAACCTC
TGCCTCTGAGGGCAATCCTTATGTGAGTTCCACCCTCAGCATCCCTGCCAGTCCTCGAGT
GGCTCGGAAGATGCTTTTGGCCTCGACCTCTTCCTGTACCTCTGATGACCTTGATAGGGC
TTCCTACTCTGGGACTAGCCCAGGTCATTCATTTCCTCCCGGAGAGCTGGACAGAGTGTT
TACAGCCAGGAGGAACTTCTCATGTGGGTCTGTCGAGTTTGATGATGCAGATCTGGACAG
CCTCAGACAGGCCTCGGGAACCCCCCAGCCTGTCCTTCGGGAACGGAAAAGCAGCATCAG
CTCCATTTCGGGACGAGATGACCTGATGGATTATCAAGCTGTCCCCTTCCACCCACTCAC
TGCTCTTGCCTCCTCTATGTTCCAGGAGAGACAGCGCCTGGAGACTATCCTCAGTCTCTG
TGCTGAATACACAAAGCCTGACAGTCGCTTGTCCACTGGCACCACTGTAGCAGATGTGCA
GAAAATCAATAAGGAGCTGGAGAAGCTGCAGATCTCTGACGAGGAGTCCGTGTTTGAAGA
ACCCCTGGTGAGCCCTGAAGCCAGGTACAGATGCCACCAGAAAAGCTCTCTCCACGATGC
AGACCTGGCAGGCTTCGGGAGCCTCAGTCAGAGCAGCGCCAGCTTCCTTCCCCCCAGGAG
CGCCAGGAACGAGGAGCTGCTCAGGGACCTCACCAGGACTCCCCACCGCCCTCTTCTGCC
TTTGTGAAAGCTTCGGGCGAGTCCACTTATTTTAGTATCCTACCAAAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|50949443|emb|CAH10396.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|50949443|emb|CAH10396.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-576, gnl|bosTau2|chr1 (32336737-32337312)
               

               
               1-576, gnl|Hg17|chr3 (113086325-113086900)
               

               
               1-576, gnl|Mm7|chr16 (45602902-45602336)
               


               
               577-1008, gnl|bosTau2|chr1 (32358633-32359066)
               

               
               577-1008, gnl|Hg17|chr3 (113114802-113115239)
               

               
               577-1008, gnl|Mm7|chr16 (45586078-45585652)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-576, gnl|bosTau2|chr1 (32336737-32337312)
               

               
               1-576, gnl|Hg17|chr3 (113086325-113086900)
               

               
               1-576, gnl|Mm7|chr16 (45602902-45602336)
               


               
               577-1008, gnl|bosTau2|chr1 (32358633-32359066)
               

               
               577-1008, gnl|Hg17|chr3 (113114802-113115239)
               

               
               577-1008, gnl|Mm7|chr16 (45586078-45585652)

	1-576, gnl\|bosTau2\|chr1 (32336737-32337312)
	1-576, gnl\|Hg17\|chr3 (113086325-113086900)
	1-576, gnl\|Mm7\|chr16 (45602902-45602336)

	577-1008, gnl\|bosTau2\|chr1 (32358633-32359066)
	577-1008, gnl\|Hg17\|chr3 (113114802-113115239)
	577-1008, gnl\|Mm7\|chr16 (45586078-45585652)