Ss1.1-Pig3-SRG8019M07.3
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ACAAATCCATCCCTATGCAAGTGGATGGGGAGCCCTGTAGGTTGGCCCCAGCTATGATTC
GGATCTCACTGAGGAATCAGGCCAACATGGTACAGAAGAGCAAGAGGAGAACGTCCATGC
CTTTACTCAACGATCCCCAGTCTGTCCCAGACCGCCTGAGGATCCGGGTGAACAAAACCA
GTTTACAAGACTATGAAGGATTCCACTACGACAAAGAGAAACTCCGGGAAGCTTGACCAT
GAAACCTCCTTCCCCAGGGCGCTCTCAGCTCAGAGACTTTCCCCACGGTGGTGCTTTCTA
GATGCAACCTCTGCTGATCGCTTTTATCGAATAGACAGATCTCAGGAACATTTACACTTT
GTGATGGAGATTTCTCAAGATGAGATTTTTATTCTGGACCCAGATATGGTGTTGTCCCAG
CAGGCGGGGACACCTCCAGGAATGCCTGACCTGGTGGTGGAGCAAGCCTCAGGAATGACA
GACTGGTGGAATCCTGCCCTCCGCAAACGCATGCTGAGTGACAGCGGCCTGGGGATGATC
ACTCCGCATTATGAAGACTCGGATCTGAGAGATTTCAGCCACTCCCGAGTGTTGCAGTAA
GAGCTTGCTCTCCTTGTCCTCTGCGCCACTGGCACTGGGGTTGCCAGGGGAGGGTTCCAT
GGGGCGTTCAGCCGTCTTGGGTGTGTGGCCCCTGTGGTTTGACATTTTATTCACCTTGTT
CCCTTTGACCCACCCCCCAAGCTTCACTTTGCACTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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ACAAATCCATCCCTATGCAAGTGGATGGGGAGCCCTGTAGGTTGGCCCCAGCTATGATTC
GGATCTCACTGAGGAATCAGGCCAACATGGTACAGAAGAGCAAGAGGAGAACGTCCATGC
CTTTACTCAACGATCCCCAGTCTGTCCCAGACCGCCTGAGGATCCGGGTGAACAAAACCA
GTTTACAAGACTATGAAGGATTCCACTACGACAAAGAGAAACTCCGGGAAGCTTGACCAT
GAAACCTCCTTCCCCAGGGCGCTCTCAGCTCAGAGACTTTCCCCACGGTGGTGCTTTCTA
GATGCAACCTCTGCTGATCGCTTTTATCGAATAGACAGATCTCAGGAACATTTACACTTT
GTGATGGAGATTTCTCAAGATGAGATTTTTATTCTGGACCCAGATATGGTGTTGTCCCAG
CAGGCGGGGACACCTCCAGGAATGCCTGACCTGGTGGTGGAGCAAGCCTCAGGAATGACA
GACTGGTGGAATCCTGCCCTCCGCAAACGCATGCTGAGTGACAGCGGCCTGGGGATGATC
ACTCCGCATTATGAAGACTCGGATCTGAGAGATTTCAGCCACTCCCGAGTGTTGCAGTAA
GAGCTTGCTCTCCTTGTCCTCTGCGCCACTGGCACTGGGGTTGCCAGGGGAGGGTTCCAT
GGGGCGTTCAGCCGTCTTGGGTGTGTGGCCCCTGTGGTTTGACATTTTATTCACCTTGTT
CCCTTTGACCCACCCCCCAAGCTTCACTTTGCACTT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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1-157, gnl|bosTau2|chr4 (54773396-54773550) |
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1-157, gnl|Hg17|chr7 (136694502-136694347) |
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1-157, gnl|Mm7|chr6 (36931760-36931606) |
| |
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341-473, gnl|bosTau2|chr4 (54856110-54856242) |
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341-473, gnl|canFam2|chr16 (14123000-14122860) |
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341-473, gnl|danRer3|chr7 (29254356-29254474) |
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341-473, gnl|fr1|chrUn (134582022-134581885) |
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341-473, gnl|galGal2|chr1 (54282265-54282128) |
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341-473, gnl|hg17|chr7 (136607904-136608044) |
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341-473, gnl|Hg17|chr7 (136608041-136607909) |
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341-473, gnl|loxAfr1|scaffold_42621 (20224-20084) |
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341-473, gnl|mm7|chr6 (36846963-36847103) |
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341-473, gnl|Mm7|chr6 (36847100-36846968) |
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341-473, gnl|monDom2|scaffold_22 (5309358-5309218) |
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341-473, gnl|oryCun1|scaffold_199037 (77130-76991) |
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341-473, gnl|panTro1|chr6 (139343359-139343499) |
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341-473, gnl|rheMac2|chr3 (174958127-174958267) |
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341-473, gnl|rn3|chr4 (64552291-64552431) |
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341-473, gnl|tetNig1|chr19 (638341-638478) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-157, gnl|bosTau2|chr4 (54773396-54773550) |
|
1-157, gnl|Hg17|chr7 (136694502-136694347) |
|
1-157, gnl|Mm7|chr6 (36931760-36931606) |
| |
|
341-473, gnl|bosTau2|chr4 (54856110-54856242) |
|
341-473, gnl|canFam2|chr16 (14123000-14122860) |
|
341-473, gnl|danRer3|chr7 (29254356-29254474) |
|
341-473, gnl|fr1|chrUn (134582022-134581885) |
|
341-473, gnl|galGal2|chr1 (54282265-54282128) |
|
341-473, gnl|hg17|chr7 (136607904-136608044) |
|
341-473, gnl|Hg17|chr7 (136608041-136607909) |
|
341-473, gnl|loxAfr1|scaffold_42621 (20224-20084) |
|
341-473, gnl|mm7|chr6 (36846963-36847103) |
|
341-473, gnl|Mm7|chr6 (36847100-36846968) |
|
341-473, gnl|monDom2|scaffold_22 (5309358-5309218) |
|
341-473, gnl|oryCun1|scaffold_199037 (77130-76991) |
|
341-473, gnl|panTro1|chr6 (139343359-139343499) |
|
341-473, gnl|rheMac2|chr3 (174958127-174958267) |
|
341-473, gnl|rn3|chr4 (64552291-64552431) |
|
341-473, gnl|tetNig1|chr19 (638341-638478) |
