Ss1.1-Pig3-SRG8019N06.5
               |  | GCAAGGTGACACTGCCTCTTTGTTTCAGCTCTCAGATTGTAAACAGATGTTTTCATAGTC
CACTTATCTCCGTGTTTTTTGCGC------------------------------------
------------------------------------------------------------
------------GAGGAAATATGGGTGTTAGATAAACTTCCTCCAGGCATATGTCTATAG
TGCTTTTTAAAATTGAAGTATAGTTGATTAACAGTATCATGTTAGTTTCAGGTATACAGC
ACAGGGATTCAGATATATATATATATGTGTGTATATATATGTGTGTGTGTGTATATATAT
ATATATGTATATGTATTTTTTCTTCTTCAGATTTTCTTCCCTTATAGGTTATAAAATATT
AAGTAGAGTTCCCTGTACTATACACTAGGTCCTTGTGGGTTATCTGTTTTATATACAGTT
TGTATATATGTTAATCCCAACCTCCCCTTGCTATTGACTGTGGGTTCACTGCTAACGAAT
TAATGATATATATGAAGTAAGGTGTCTTTAAACACATTAGGCAAAGTTTTGTTTTAATTT
GTTGACAAAAGTATTGTGAATAGAGACTTGCAGGATCCTCTCCTTGCATTTACTCTGGGA
GCAAGGGTTCAGTATTTCAGGTTCTTATAGCTTGAGTGTCTGCCTCCCCTCCCCCCACCT
CCTCCCAGCCTCTGACTGTGGGTCTCGCTGTCACAATGTGTGTTGGGAGAGGGAATCATT
GCCCCCCCACACCGCCCCTGCAAA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | GCAAGGTGACACTGCCTCTTTGTTTCAGCTCTCAGATTGTAAACAGATGTTTTCATAGTC
CACTTATCTCCGTGTTTTTTGCGC------------------------------------
------------------------------------------------------------
------------GAGGAAATATGGGTGTTAGATAAACTTCCTCCAGGCATATGTCTATAG
TGCTTTTTAAAATTGAAGTATAGTTGATTAACAGTATCATGTTAGTTTCAGGTATACAGC
ACAGGGATTCAGATATATATATATATGTGTGTATATATATGTGTGTGTGTGTATATATAT
ATATATGTATATGTATTTTTTCTTCTTCAGATTTTCTTCCCTTATAGGTTATAAAATATT
AAGTAGAGTTCCCTGTACTATACACTAGGTCCTTGTGGGTTATCTGTTTTATATACAGTT
TGTATATATGTTAATCCCAACCTCCCCTTGCTATTGACTGTGGGTTCACTGCTAACGAAT
TAATGATATATATGAAGTAAGGTGTCTTTAAACACATTAGGCAAAGTTTTGTTTTAATTT
GTTGACAAAAGTATTGTGAATAGAGACTTGCAGGATCCTCTCCTTGCATTTACTCTGGGA
GCAAGGGTTCAGTATTTCAGGTTCTTATAGCTTGAGTGTCTGCCTCCCCTCCCCCCACCT
CCTCCCAGCCTCTGACTGTGGGTCTCGCTGTCACAATGTGTGTTGGGAGAGGGAATCATT
GCCCCCCCACACCGCCCCTGCAAA | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map