Ss1.1-Pig3-SRG8019N15.5
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CTCCCCAGCCTCGTACCTGGTTACCTAGGAGACGGCGAGGCGCTCACCCTCCTGGTTTGG
GTCGTGCTTCTTTGCTCCATGCCTTGGCTCATGCGGCAGGTGGGGGAGAGTAAACGTGTT
GACCCAAAGTTGCAACTCCCAAGAAGAAACCTCACGTCGGGTTGCAGGAAAGCAACAAAC
CTGTACAGGCTGGATAGGAGAATGTGTGGGACAAGCAGGGCCTCGTGATTTCAGCTACTT
GCTTGGGCCTTCCCAAGCCCCACTGTGTGGGTTGAGGGAGTCCTTTCCCGGTGACCTCCA
AAACAAAGCGTTCGTGTTCTCCAACTCCGCCTCTTTCCTAACTGCTGGCTTTGTTGAACC
AAGATGACCCACAGTATGGAGCTGCTGAAAGGACGAGGGGCAACATGAACAACAAAATAA
GACCACTGGGAGTTCCTGCTGTGGCGCAATGGCATTGGCGTCATCTCTGCAGCGCCAGGA
TGCAGCAGCCTGACCTCGTCCACTAGGAGAAAAACAGGAAGCTGAGTTCTGCCAGGAATG
GGAACACACCCTTCCTCATCCCTGGGATGGAGGACGATACGGTGGTGGGGGGCCCTGGGG
ACAGGACATGGGACAGTGTGTGGGGTAGGGGCTATGCTGGCCAAGCCAGGGTGGCATGGG
CCCCGCCACCTCGATGAGTGTTTTGGCACAATGACTGGGCTTGCTCTGACTGGCCTTGCT
GCGCGGTCCCTGGGACCAGGAGAGTCTGGAGGAGGGTGTCCTGGTCTCTCCTGTGTGAGG
ACAGAATTATGGGCACTGGGGCCATGTATGATTTTGGCCTTCGTAGGCCCTTCCTCCATA
AAAAATACGAAAAACTATCATACAGCTGTGTTGGTAGAAAGATGAATAAAATCCAAGCTG
GATGCATGATCA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CTCCCCAGCCTCGTACCTGGTTACCTAGGAGACGGCGAGGCGCTCACCCTCCTGGTTTGG
GTCGTGCTTCTTTGCTCCATGCCTTGGCTCATGCGGCAGGTGGGGGAGAGTAAACGTGTT
GACCCAAAGTTGCAACTCCCAAGAAGAAACCTCACGTCGGGTTGCAGGAAAGCAACAAAC
CTGTACAGGCTGGATAGGAGAATGTGTGGGACAAGCAGGGCCTCGTGATTTCAGCTACTT
GCTTGGGCCTTCCCAAGCCCCACTGTGTGGGTTGAGGGAGTCCTTTCCCGGTGACCTCCA
AAACAAAGCGTTCGTGTTCTCCAACTCCGCCTCTTTCCTAACTGCTGGCTTTGTTGAACC
AAGATGACCCACAGTATGGAGCTGCTGAAAGGACGAGGGGCAACATGAACAACAAAATAA
GACCACTGGGAGTTCCTGCTGTGGCGCAATGGCATTGGCGTCATCTCTGCAGCGCCAGGA
TGCAGCAGCCTGACCTCGTCCACTAGGAGAAAAACAGGAAGCTGAGTTCTGCCAGGAATG
GGAACACACCCTTCCTCATCCCTGGGATGGAGGACGATACGGTGGTGGGGGGCCCTGGGG
ACAGGACATGGGACAGTGTGTGGGGTAGGGGCTATGCTGGCCAAGCCAGGGTGGCATGGG
CCCCGCCACCTCGATGAGTGTTTTGGCACAATGACTGGGCTTGCTCTGACTGGCCTTGCT
GCGCGGTCCCTGGGACCAGGAGAGTCTGGAGGAGGGTGTCCTGGTCTCTCCTGTGTGAGG
ACAGAATTATGGGCACTGGGGCCATGTATGATTTTGGCCTTCGTAGGCCCTTCCTCCATA
AAAAATACGAAAAACTATCATACAGCTGTGTTGGTAGAAAGATGAATAAAATCCAAGCTG
GATGCATGATCA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
100-277, gnl|bosTau2|chr19 (37061748-37061565) |
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100-277, gnl|Hg17|chr17 (40752391-40752571) |
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100-277, gnl|Mm7|chr11 (103378343-103378526) |
| |
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482-886, gnl|bosTau2|chr19 (37008226-37007807) |
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482-886, gnl|canFam2|chr9 (21553447-21553066) |
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482-886, gnl|dasNov1|scaffold_12326 (51453-51870) |
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482-886, gnl|echTel1|scaffold_320777 (39208-39590) |
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482-886, gnl|hg17|chr17 (40771483-40771905) |
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482-886, gnl|Hg17|chr17 (40771634-40772061) |
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482-886, gnl|loxAfr1|scaffold_30711 (7851-8289) |
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482-886, gnl|mm7|chr11 (103395014-103395434) |
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482-886, gnl|Mm7|chr11 (103395133-103395550) |
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482-886, gnl|oryCun1|scaffold_170519 (4457-4101) |
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482-886, gnl|panTro1|chr19 (44068313-44068735) |
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482-886, gnl|rheMac2|chr16 (55438558-55438972) |
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482-886, gnl|rn3|chr10 (92489405-92489776) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
100-277, gnl|bosTau2|chr19 (37061748-37061565) |
|
100-277, gnl|Hg17|chr17 (40752391-40752571) |
|
100-277, gnl|Mm7|chr11 (103378343-103378526) |
| |
|
482-886, gnl|bosTau2|chr19 (37008226-37007807) |
|
482-886, gnl|canFam2|chr9 (21553447-21553066) |
|
482-886, gnl|dasNov1|scaffold_12326 (51453-51870) |
|
482-886, gnl|echTel1|scaffold_320777 (39208-39590) |
|
482-886, gnl|hg17|chr17 (40771483-40771905) |
|
482-886, gnl|Hg17|chr17 (40771634-40772061) |
|
482-886, gnl|loxAfr1|scaffold_30711 (7851-8289) |
|
482-886, gnl|mm7|chr11 (103395014-103395434) |
|
482-886, gnl|Mm7|chr11 (103395133-103395550) |
|
482-886, gnl|oryCun1|scaffold_170519 (4457-4101) |
|
482-886, gnl|panTro1|chr19 (44068313-44068735) |
|
482-886, gnl|rheMac2|chr16 (55438558-55438972) |
|
482-886, gnl|rn3|chr10 (92489405-92489776) |
