Ss1.1-Pig3-SRG8020G18.5
|
CCTGATAGCCCGTTTCCCGGTGCCCATCGCATAGCCTATTGCTGAGCAGGGGGCGGTGTC
TGCGAAGGGAATCATTGCACGATGCCACGGGCAGGGGCAGGCCGGCCAGCGGCCTCTGGC
TGTCATATGCTCGGCCAGAGCTCATGGCCCTCTCCCGTCTCCCCTTGATGTGCTTCACCA
GGCGGGGTGCGCTGCCCCTTCCTGAGCGGAAAATGTGAGGCCTGGCCTCCCGAAGGGACG
CGTGGGGGTGGGAGCGGACATTACTCAGCTCCCGGGCAGACAGGAAGCTAGCGCCCGGGA
GAACGAGGGTCATGCTTCCATCTTCTTGCAGGGTCGCGGTGGGCGGGGGCTGGGCAGCAC
TTGGGGGCATATATCGTTTGTGCATATCAGATGAGAGGCCCATCCTGCCATGGGATTCCA
GGTGCCGCGCTTCCTGCTTGCAGGCTGGACGCAGGCGATGGTTCCTCCAGGGCCTCCACC
AGTTATGCTGTGTGCGTGTTGGTGATGGAGGATGATAAGCCCGTCCCTGGCCTTGTCCCT
TTGAGGAGCTTGCAGGAAAGGGACAGGCGCACAGAACATGGGATCTTGCCAGGCTGTAGG
CTTTCTGAGGGCAGGAGGTGTGTCTTTGAAGAAGAGTATCTTGCTTTTTATCTCATTTCA
CAAGTATTATATTATTGTAGAAAAAAGGAAGCCAAAAAAAAGACACTCAAAACCACCAAT
GTTTGGGCCTGTTTTTCTTAGACTTTTCTGTGTATGTAATCAAAGTCTTGTTTTCCGCTA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCTGATAGCCCGTTTCCCGGTGCCCATCGCATAGCCTATTGCTGAGCAGGGGGCGGTGTC
TGCGAAGGGAATCATTGCACGATGCCACGGGCAGGGGCAGGCCGGCCAGCGGCCTCTGGC
TGTCATATGCTCGGCCAGAGCTCATGGCCCTCTCCCGTCTCCCCTTGATGTGCTTCACCA
GGCGGGGTGCGCTGCCCCTTCCTGAGCGGAAAATGTGAGGCCTGGCCTCCCGAAGGGACG
CGTGGGGGTGGGAGCGGACATTACTCAGCTCCCGGGCAGACAGGAAGCTAGCGCCCGGGA
GAACGAGGGTCATGCTTCCATCTTCTTGCAGGGTCGCGGTGGGCGGGGGCTGGGCAGCAC
TTGGGGGCATATATCGTTTGTGCATATCAGATGAGAGGCCCATCCTGCCATGGGATTCCA
GGTGCCGCGCTTCCTGCTTGCAGGCTGGACGCAGGCGATGGTTCCTCCAGGGCCTCCACC
AGTTATGCTGTGTGCGTGTTGGTGATGGAGGATGATAAGCCCGTCCCTGGCCTTGTCCCT
TTGAGGAGCTTGCAGGAAAGGGACAGGCGCACAGAACATGGGATCTTGCCAGGCTGTAGG
CTTTCTGAGGGCAGGAGGTGTGTCTTTGAAGAAGAGTATCTTGCTTTTTATCTCATTTCA
CAAGTATTATATTATTGTAGAAAAAAGGAAGCCAAAAAAAAGACACTCAAAACCACCAAT
GTTTGGGCCTGTTTTTCTTAGACTTTTCTGTGTATGTAATCAAAGTCTTGTTTTCCGCTA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
44-349, gnl|bosTau2|chr13 (42822199-42821887) |
|
44-349, gnl|canFam2|chr24 (24804022-24804256) |
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44-349, gnl|hg17|chr20 (30521529-30521765) |
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44-349, gnl|Hg17|chr20 (30521902-30521542) |
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44-349, gnl|mm7|chr2 (153173511-153173735) |
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44-349, gnl|Mm7|chr2 (153173841-153173514) |
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44-349, gnl|monDom2|scaffold_38 (554659-554411) |
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44-349, gnl|panTro1|chr21 (32219924-32220161) |
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44-349, gnl|rheMac2|chr10 (32108725-32108489) |
| |
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507-775, gnl|bosTau2|chr13 (42821602-42821339) |
|
507-775, gnl|Hg17|chr20 (30521325-30520723) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
44-349, gnl|bosTau2|chr13 (42822199-42821887) |
|
44-349, gnl|canFam2|chr24 (24804022-24804256) |
|
44-349, gnl|hg17|chr20 (30521529-30521765) |
|
44-349, gnl|Hg17|chr20 (30521902-30521542) |
|
44-349, gnl|mm7|chr2 (153173511-153173735) |
|
44-349, gnl|Mm7|chr2 (153173841-153173514) |
|
44-349, gnl|monDom2|scaffold_38 (554659-554411) |
|
44-349, gnl|panTro1|chr21 (32219924-32220161) |
|
44-349, gnl|rheMac2|chr10 (32108725-32108489) |
| |
|
507-775, gnl|bosTau2|chr13 (42821602-42821339) |
|
507-775, gnl|Hg17|chr20 (30521325-30520723) |
