Non-Coding RNA Search

Ss1.1-Pig3-SRG8021A06.3

Sequence:


               
               GGCCAAACCTGGCCAAGACCGCGGCTGCCGGGAACGCTCGCAGTCGGCGTCTCGGCCTCA
GCGGAGGGTGCGGCCGCCGCAATGCCGTTCCTGCACGGCTTCCGGAGGATCATCTTCGAG
TATCATCCGCTGGTGGACGCGATTCTGGGCTCCTTGGGGATCCATGACCCTGAGCGGCAG
GAGGCGGCTGGACGGACCCATTTATGTCGCGAGTGAGGAGAGCCGGATCCTTGTTCTCAC
TGAGCTGCTGGAGAGAAAGGCCCACTCTCCCTTCTACCAGGAAGGCGTGAGCAACGCCCT
GCTGAATATGGCCGATCTGGGGCTGACCCGTGCCGCTGACGTTCTCCTGCGGAATGGAGC
CAACCTCAACTTTGAAGACCCGGTCACCTACTACACGGCTCTGCACATCGCCGTCCTGCG
AAACCANCCTGACATGGTGGAGCTGCTGGTGCGCCACGGGGCCGACATTAACCGGATGGA
CCGGATCCATGAGAGCAGCCCCTTGGACCTGGCCAGCGAGGAGCCCGAGCGCTTGCCATG
CATGCAGCGCATCATGGACCTCGGCGCAGACGTCAACGCGGCCGACAAGCACGGGAAGAC
GGCCATGCTCCACGCTCTGGCCAGCAGCGACGGGGTGCAGATCCACAACACCGAGAACAT
CCGGCTCCTGTGGAAGGAGGGGCCGACGTCAAGGCCACCACCAAAGACGGGGACACGGTG
TTCACCTGCATCATCTTCCTGCTGGGGGAGACGGTGGGCGGGGACAAGGAGGAGGCCCAG
CTCATCAACCGCTTCTGCTTCCAAGTGACGCGGCTGCTGCTGGCTCACGGCGCCGACCCC
AGCGAGTGCCCCGCGCACGAGTCCCTCACCCACATCTGCCTCAAGAGCTTCAAACTGCAC
TTCCCTATCATGCGCTTCCTGCTGGAGTCCGGCGCCGCCTATAACTGCTCCCTGCACGGC
GCGTCCTGCTGGTCCGGCTTCCACATCATCTTCGAGCGGCTCTGCTCCCACCCAGGATGC
GCCGAGGACGAGAGCCACGTGGACCTGCTGCGCAAGGCGGAGACCGTCCTGGACCTCATG
GTGACCAACTCGCACAAACTCCAGCTGCCCGAAAACTTCGACATCCACCCACTCCGCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCAAACCTGGCCAAGACCGCGGCTGCCGGGAACGCTCGCAGTCGGCGTCTCGGCCTCA
GCGGAGGGTGCGGCCGCCGCAATGCCGTTCCTGCACGGCTTCCGGAGGATCATCTTCGAG
TATCATCCGCTGGTGGACGCGATTCTGGGCTCCTTGGGGATCCATGACCCTGAGCGGCAG
GAGGCGGCTGGACGGACCCATTTATGTCGCGAGTGAGGAGAGCCGGATCCTTGTTCTCAC
TGAGCTGCTGGAGAGAAAGGCCCACTCTCCCTTCTACCAGGAAGGCGTGAGCAACGCCCT
GCTGAATATGGCCGATCTGGGGCTGACCCGTGCCGCTGACGTTCTCCTGCGGAATGGAGC
CAACCTCAACTTTGAAGACCCGGTCACCTACTACACGGCTCTGCACATCGCCGTCCTGCG
AAACCANCCTGACATGGTGGAGCTGCTGGTGCGCCACGGGGCCGACATTAACCGGATGGA
CCGGATCCATGAGAGCAGCCCCTTGGACCTGGCCAGCGAGGAGCCCGAGCGCTTGCCATG
CATGCAGCGCATCATGGACCTCGGCGCAGACGTCAACGCGGCCGACAAGCACGGGAAGAC
GGCCATGCTCCACGCTCTGGCCAGCAGCGACGGGGTGCAGATCCACAACACCGAGAACAT
CCGGCTCCTGTGGAAGGAGGGGCCGACGTCAAGGCCACCACCAAAGACGGGGACACGGTG
TTCACCTGCATCATCTTCCTGCTGGGGGAGACGGTGGGCGGGGACAAGGAGGAGGCCCAG
CTCATCAACCGCTTCTGCTTCCAAGTGACGCGGCTGCTGCTGGCTCACGGCGCCGACCCC
AGCGAGTGCCCCGCGCACGAGTCCCTCACCCACATCTGCCTCAAGAGCTTCAAACTGCAC
TTCCCTATCATGCGCTTCCTGCTGGAGTCCGGCGCCGCCTATAACTGCTCCCTGCACGGC
GCGTCCTGCTGGTCCGGCTTCCACATCATCTTCGAGCGGCTCTGCTCCCACCCAGGATGC
GCCGAGGACGAGAGCCACGTGGACCTGCTGCGCAAGGCGGAGACCGTCCTGGACCTCATG
GTGACCAACTCGCACAAACTCCAGCTGCCCGAAAACTTCGACATCCACCCACTCCGCCCA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q5U3L6_MOUSE

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q5U3L6_MOUSE

Aligned organism(s): 9 entry(ies)

More info

Aligned organism(s): 9 entry(ies)

Help | Less info


               
               1-195, gnl|bosTau2|chr11 (79417976-79417783)
               

               
               1-195, gnl|Hg17|chr9 (129483935-129483720)
               

               
               1-195, gnl|Mm7|chr2 (30835540-30835385)
               


               
               197-377, gnl|bosTau2|chr11 (79416728-79416548)
               

               
               197-377, gnl|Hg17|chr9 (129482554-129482374)
               

               
               197-377, gnl|Mm7|chr2 (30834414-30834234)
               


               
               678-1130, gnl|bosTau2|chr11 (79414338-79413886)
               

               
               678-1130, gnl|Hg17|chr9 (129480292-129479840)
               

               
               678-1130, gnl|Mm7|chr2 (30831817-30831365)

Aligned organism(s): 9 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-195, gnl|bosTau2|chr11 (79417976-79417783)
               

               
               1-195, gnl|Hg17|chr9 (129483935-129483720)
               

               
               1-195, gnl|Mm7|chr2 (30835540-30835385)
               


               
               197-377, gnl|bosTau2|chr11 (79416728-79416548)
               

               
               197-377, gnl|Hg17|chr9 (129482554-129482374)
               

               
               197-377, gnl|Mm7|chr2 (30834414-30834234)
               


               
               678-1130, gnl|bosTau2|chr11 (79414338-79413886)
               

               
               678-1130, gnl|Hg17|chr9 (129480292-129479840)
               

               
               678-1130, gnl|Mm7|chr2 (30831817-30831365)

	1-195, gnl\|bosTau2\|chr11 (79417976-79417783)
	1-195, gnl\|Hg17\|chr9 (129483935-129483720)
	1-195, gnl\|Mm7\|chr2 (30835540-30835385)

	197-377, gnl\|bosTau2\|chr11 (79416728-79416548)
	197-377, gnl\|Hg17\|chr9 (129482554-129482374)
	197-377, gnl\|Mm7\|chr2 (30834414-30834234)

	678-1130, gnl\|bosTau2\|chr11 (79414338-79413886)
	678-1130, gnl\|Hg17\|chr9 (129480292-129479840)
	678-1130, gnl\|Mm7\|chr2 (30831817-30831365)