Non-Coding RNA Search

Ss1.1-Pig3-SRG8021B17.3

Sequence:


               
               TATAACCTATCCGACAACATAGTCGCCAAGCTGTTTCCATACATTCAAAAGGGGTTGAAA
TCATCTCTACCAGATTACAGAGCTGCAACGTACATGATAATATGTCAGATTTCTGTGAAA
GTGACCATGGAAGATACCTTCGTTAATTCACTGGCTTCGCAGATCATCAAAACGTTGACC
AGAATTCCCTCTTTGATTAAAGATGGATTGGGCTGCTTGATAGTGCTCCTGCAGAGACAG
AAGCCAGAGAGCTTGGGGAAGAAGCCATTTCCTCACTTGTGTAAGGTTCCTGATCTTATT
ACACTGCTTCAGGGGATTTCTGAAACCTACGACATCAGTCCTCTTCTACGTTACATGCTT
CCCCATCTGGTTGTCTCCATCATTAGTCATGTTACAGGAGAAGAAACTGAAGAGATAGAT
GGTCAAATCTACCGGCAACTCTTGGAAGCCATACTTACAAATATATCCCTCAAGAACAAC
TTAGACCATTTGTTGGCGGGCCTTCTTTTTGAAGAGTATATTTCATACAGTTCGCAGGAA
GAGATCGATTCTAATAAAATATCTTTGCTTAATGAACAGTTTCTTCCATTTATTAGGCTT
TTAGAAAGCAGATATCCCAAAACATTAGATGCTGTGTTAGAGGAACACTTAAAGGAAATT
ACAGACTTAAAAAAACAGGAGCTTTTCCACCAATTTATCTCTCTTTCTACAAGTGGGGGA
AAATATCAGGTAACTTTTTAAAATAACTGGAATGTGATGCTTTTTTCAGAAAAATTGTTG
TTTGGAAATTTTTATGTGTGATGTTCCTAGGCAACCACCAGAAGGCGGCCTAACAGTGTC
CTAGTGTACATAGCTTCCTCTTTTATCTGCACTTTCCAGTGAGGCGCCCACAGCCACAGG
TGGCTATTTAAGGCATTGATTAGAAAAGGGGAGTGGATTTTTGTTTCGTGATTATGTTAG
AACTTCCGAAGTTTTCTGGTGATTCACCTTAAGTCTTTATTACTGGAAGTTACCATATAA
GTAGTTTTTAATACTTACCTTTGAAAATAAATATCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATAACCTATCCGACAACATAGTCGCCAAGCTGTTTCCATACATTCAAAAGGGGTTGAAA
TCATCTCTACCAGATTACAGAGCTGCAACGTACATGATAATATGTCAGATTTCTGTGAAA
GTGACCATGGAAGATACCTTCGTTAATTCACTGGCTTCGCAGATCATCAAAACGTTGACC
AGAATTCCCTCTTTGATTAAAGATGGATTGGGCTGCTTGATAGTGCTCCTGCAGAGACAG
AAGCCAGAGAGCTTGGGGAAGAAGCCATTTCCTCACTTGTGTAAGGTTCCTGATCTTATT
ACACTGCTTCAGGGGATTTCTGAAACCTACGACATCAGTCCTCTTCTACGTTACATGCTT
CCCCATCTGGTTGTCTCCATCATTAGTCATGTTACAGGAGAAGAAACTGAAGAGATAGAT
GGTCAAATCTACCGGCAACTCTTGGAAGCCATACTTACAAATATATCCCTCAAGAACAAC
TTAGACCATTTGTTGGCGGGCCTTCTTTTTGAAGAGTATATTTCATACAGTTCGCAGGAA
GAGATCGATTCTAATAAAATATCTTTGCTTAATGAACAGTTTCTTCCATTTATTAGGCTT
TTAGAAAGCAGATATCCCAAAACATTAGATGCTGTGTTAGAGGAACACTTAAAGGAAATT
ACAGACTTAAAAAAACAGGAGCTTTTCCACCAATTTATCTCTCTTTCTACAAGTGGGGGA
AAATATCAGGTAACTTTTTAAAATAACTGGAATGTGATGCTTTTTTCAGAAAAATTGTTG
TTTGGAAATTTTTATGTGTGATGTTCCTAGGCAACCACCAGAAGGCGGCCTAACAGTGTC
CTAGTGTACATAGCTTCCTCTTTTATCTGCACTTTCCAGTGAGGCGCCCACAGCCACAGG
TGGCTATTTAAGGCATTGATTAGAAAAGGGGAGTGGATTTTTGTTTCGTGATTATGTTAG
AACTTCCGAAGTTTTCTGGTGATTCACCTTAAGTCTTTATTACTGGAAGTTACCATATAA
GTAGTTTTTAATACTTACCTTTGAAAATAAATATCA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|51459128|ref|XP_496444.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|51459128|ref|XP_496444.1|

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               50-264, gnl|bosTau2|chr28 (4784112-4783898)
               

               
               50-264, gnl|Hg17|chr1 (233085387-233085173)
               

               
               50-264, gnl|Mm7|chr13 (12363639-12363853)
               


               
               489-614, gnl|bosTau2|chr28 (4780193-4780068)
               

               
               489-614, gnl|Hg17|chr1 (233081986-233081861)
               

               
               489-614, gnl|Mm7|chr13 (12366941-12367066)
               


               
               736-1052, gnl|bosTau2|chr28 (4779349-4779027)
               

               
               736-1052, gnl|Hg17|chr1 (233081140-233080824)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               50-264, gnl|bosTau2|chr28 (4784112-4783898)
               

               
               50-264, gnl|Hg17|chr1 (233085387-233085173)
               

               
               50-264, gnl|Mm7|chr13 (12363639-12363853)
               


               
               489-614, gnl|bosTau2|chr28 (4780193-4780068)
               

               
               489-614, gnl|Hg17|chr1 (233081986-233081861)
               

               
               489-614, gnl|Mm7|chr13 (12366941-12367066)
               


               
               736-1052, gnl|bosTau2|chr28 (4779349-4779027)
               

               
               736-1052, gnl|Hg17|chr1 (233081140-233080824)

	50-264, gnl\|bosTau2\|chr28 (4784112-4783898)
	50-264, gnl\|Hg17\|chr1 (233085387-233085173)
	50-264, gnl\|Mm7\|chr13 (12363639-12363853)

	489-614, gnl\|bosTau2\|chr28 (4780193-4780068)
	489-614, gnl\|Hg17\|chr1 (233081986-233081861)
	489-614, gnl\|Mm7\|chr13 (12366941-12367066)

	736-1052, gnl\|bosTau2\|chr28 (4779349-4779027)
	736-1052, gnl\|Hg17\|chr1 (233081140-233080824)