Ss1.1-Pig3-SRG8021D24.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATAACTTTCTCAACGCAAAGGACGCCGTGCGTGTGGCCAAGGAGGCGAGGCCGGCCTTT CTCAAGTTTCTGGAGCAAAGCATGCGGGAGAACAAGGAGAAGCAGGCGCTGTCCGACCTC ATGATCAAGCCGGTGCAGCGGATCCCACGCTATGAGCTTCTGGTGAAGGACCTCCTAAAG CACACGCCCGAGGACCACCCCGACCATCCCCTCCTGCTGGACGCGCAGCGGAACATCAAG CAGGTGGCCGAACGCATCAACAAGGGCGTGCGGAGCGCCGAGGAGGCCGAGCGGCACGCC CGCGTGCTGCAGGAGATCGAGGCCCACATCGAGGGCATGGAGGACCTCCAGGCCCCTCTG CGGCGGTTCCTGAGGCAGGAGATTGTCACCGAAGTGAAGGCCGTCGGGGGCAAGAAGGAC CGGTCCCTCTTCCTGTTCACGGACCTCATTGTCTGCACCACCCTGAAGCGGAAGTCGGGC TCCCTGAGGCGCAGCTCCATGAGCCTGTACACGGCTGCCAGCGTCATTGACACGGCCAGC AAGTACAAGCTGCTCTGGAAGCTGCCGCTGGAAGACGCGGACATCATCAAAGGGGCATCC CAAGCCGCCAATCGGGAGAGCATCCAGAAGGCCATCAGCCGCCTAGACGAGGACCTGACC ACCGTGGGCCAGATGAGCAAGCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATAACTTTCTCAACGCAAAGGACGCCGTGCGTGTGGCCAAGGAGGCGAGGCCGGCCTTT CTCAAGTTTCTGGAGCAAAGCATGCGGGAGAACAAGGAGAAGCAGGCGCTGTCCGACCTC ATGATCAAGCCGGTGCAGCGGATCCCACGCTATGAGCTTCTGGTGAAGGACCTCCTAAAG CACACGCCCGAGGACCACCCCGACCATCCCCTCCTGCTGGACGCGCAGCGGAACATCAAG CAGGTGGCCGAACGCATCAACAAGGGCGTGCGGAGCGCCGAGGAGGCCGAGCGGCACGCC CGCGTGCTGCAGGAGATCGAGGCCCACATCGAGGGCATGGAGGACCTCCAGGCCCCTCTG CGGCGGTTCCTGAGGCAGGAGATTGTCACCGAAGTGAAGGCCGTCGGGGGCAAGAAGGAC CGGTCCCTCTTCCTGTTCACGGACCTCATTGTCTGCACCACCCTGAAGCGGAAGTCGGGC TCCCTGAGGCGCAGCTCCATGAGCCTGTACACGGCTGCCAGCGTCATTGACACGGCCAGC AAGTACAAGCTGCTCTGGAAGCTGCCGCTGGAAGACGCGGACATCATCAAAGGGGCATCC CAAGCCGCCAATCGGGAGAGCATCCAGAAGGCCATCAGCCGCCTAGACGAGGACCTGACC ACCGTGGGCCAGATGAGCAAGCTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 206-325, + strand, RNAz p=0.524362 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 206-325, + strand, RNAz p=0.524362 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 167-344, gnl|bosTau2|chr15 (41709281-41709458) | |
| 167-344, gnl|canFam2|chr21 (27874583-27874386) | |
| 167-344, gnl|danRer3|chr18 (1242814-1242995) | |
| 167-344, gnl|dasNov1|scaffold_114395 (4056-3884) | |
| 167-344, gnl|echTel1|scaffold_212576 (4505-4305) | |
| 167-344, gnl|fr1|chrUn (259494952-259494767) | |
| 167-344, gnl|galGal2|chr1 (187445790-187445592) | |
| 167-344, gnl|hg17|chr11 (72744857-72745064) | |
| 167-344, gnl|Hg17|chr11 (72744866-72745043) | |
| 167-344, gnl|loxAfr1|scaffold_31884 (405-207) | |
| 167-344, gnl|mm7|chr7 (96929551-96929351) | |
| 167-344, gnl|Mm7|chr7 (96929540-96929363) | |
| 167-344, gnl|monDom2|scaffold_74 (4257423-4257220) | |
| 167-344, gnl|oryCun1|scaffold_202614 (44071-44274) | |
| 167-344, gnl|panTro1|chr9 (74023999-74024206) | |
| 167-344, gnl|rheMac2|chr14 (71473477-71473683) | |
| 167-344, gnl|rn3|chr1 (158410178-158409978) | |
| 167-344, gnl|tetNig1|chr10 (9502645-9502831) | |
| 167-344, gnl|xenTro1|scaffold_1545 (115202-115001) | |
| 396-508, gnl|bosTau2|chr15 (41710043-41710155) | |
| 396-508, gnl|canFam2|chr21 (27873774-27873650) | |
| 396-508, gnl|danRer3|chr18 (1244494-1244614) | |
| 396-508, gnl|dasNov1|scaffold_114395 (3833-3731) | |
| 396-508, gnl|echTel1|scaffold_212576 (3433-3295) | |
| 396-508, gnl|fr1|chrUn (259494330-259494186) | |
| 396-508, gnl|hg17|chr11 (72745718-72745859) | |
| 396-508, gnl|Hg17|chr11 (72745717-72745829) | |
| 396-508, gnl|loxAfr1|scaffold_19120 (4327-4468) | |
| 396-508, gnl|mm7|chr7 (96928767-96928627) | |
| 396-508, gnl|Mm7|chr7 (96928766-96928654) | |
| 396-508, gnl|monDom2|scaffold_74 (4252519-4252375) | |
| 396-508, gnl|oryCun1|scaffold_202614 (44815-44954) | |
| 396-508, gnl|panTro1|chr9 (74024861-74025002) | |
| 396-508, gnl|rheMac2|chr14 (71474319-71474460) | |
| 396-508, gnl|rn3|chr1 (158409387-158409247) | |
| 396-508, gnl|tetNig1|chr10 (9503220-9503337) | |
| 396-508, gnl|xenTro1|scaffold_1545 (114138-113999) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 167-344, gnl|bosTau2|chr15 (41709281-41709458) | |
| 167-344, gnl|canFam2|chr21 (27874583-27874386) | |
| 167-344, gnl|danRer3|chr18 (1242814-1242995) | |
| 167-344, gnl|dasNov1|scaffold_114395 (4056-3884) | |
| 167-344, gnl|echTel1|scaffold_212576 (4505-4305) | |
| 167-344, gnl|fr1|chrUn (259494952-259494767) | |
| 167-344, gnl|galGal2|chr1 (187445790-187445592) | |
| 167-344, gnl|hg17|chr11 (72744857-72745064) | |
| 167-344, gnl|Hg17|chr11 (72744866-72745043) | |
| 167-344, gnl|loxAfr1|scaffold_31884 (405-207) | |
| 167-344, gnl|mm7|chr7 (96929551-96929351) | |
| 167-344, gnl|Mm7|chr7 (96929540-96929363) | |
| 167-344, gnl|monDom2|scaffold_74 (4257423-4257220) | |
| 167-344, gnl|oryCun1|scaffold_202614 (44071-44274) | |
| 167-344, gnl|panTro1|chr9 (74023999-74024206) | |
| 167-344, gnl|rheMac2|chr14 (71473477-71473683) | |
| 167-344, gnl|rn3|chr1 (158410178-158409978) | |
| 167-344, gnl|tetNig1|chr10 (9502645-9502831) | |
| 167-344, gnl|xenTro1|scaffold_1545 (115202-115001) | |
| 396-508, gnl|bosTau2|chr15 (41710043-41710155) | |
| 396-508, gnl|canFam2|chr21 (27873774-27873650) | |
| 396-508, gnl|danRer3|chr18 (1244494-1244614) | |
| 396-508, gnl|dasNov1|scaffold_114395 (3833-3731) | |
| 396-508, gnl|echTel1|scaffold_212576 (3433-3295) | |
| 396-508, gnl|fr1|chrUn (259494330-259494186) | |
| 396-508, gnl|hg17|chr11 (72745718-72745859) | |
| 396-508, gnl|Hg17|chr11 (72745717-72745829) | |
| 396-508, gnl|loxAfr1|scaffold_19120 (4327-4468) | |
| 396-508, gnl|mm7|chr7 (96928767-96928627) | |
| 396-508, gnl|Mm7|chr7 (96928766-96928654) | |
| 396-508, gnl|monDom2|scaffold_74 (4252519-4252375) | |
| 396-508, gnl|oryCun1|scaffold_202614 (44815-44954) | |
| 396-508, gnl|panTro1|chr9 (74024861-74025002) | |
| 396-508, gnl|rheMac2|chr14 (71474319-71474460) | |
| 396-508, gnl|rn3|chr1 (158409387-158409247) | |
| 396-508, gnl|tetNig1|chr10 (9503220-9503337) | |
| 396-508, gnl|xenTro1|scaffold_1545 (114138-113999) |